RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 RECQL4O94761 1208 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 BMP15O95972 392 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 CNPP09543 421 aaKnown RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 PLA2G4BP0C869 781 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 HOXB8P17481 243 aaPredicted RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 NPTX2P47972 431 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 GLUD2P49448 558 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 PMS1P54277 932 aaKnown RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 ATP2C1P98194 919 aaPredicted RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 GRIK3Q13003 919 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 SF3A1Q15459 793 aaKnown RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 DCAF4L1Q3SXM0 396 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 BBS9Q3SYG4 887 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 GLRA4Q5JXX5 417 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 RINT1Q6NUQ1 792 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 TAS1R1Q7RTX1 841 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 BRAPQ7Z569 592 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 GPBP1Q86WP2 473 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 COLGALT2Q8IYK4 626 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 MYCT1Q8N699 235 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 C19orf47Q8N9M1 422 aaKnown RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 RIN2Q8WYP3 895 aaPredicted RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 FAM122AQ96E09 287 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 KLHL5Q96PQ7 755 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 LRFN3Q9BTN0 628 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 MRPL4Q9BYD3 311 aaKnown RBP8.99□□□□□ -0.97
DNMT1-219ENST00000589349 FZD8Q9H461 694 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 CDH22Q9UJ99 828 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 NR2E1Q9Y466 385 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 PLXNA4Q9HCM2 1894 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 CACNA1AO00555 2505 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 BRWD1Q9NSI6 2320 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 SHISA3A0PJX4 238 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 WASH4PA8MWX3 477 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 F8W810 466 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 TBCAO75347 108 aaKnown RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 GLUD1P00367 558 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 SOD2P04179 222 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 ATF4P18848 351 aaPredicted RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 MARCKSP29966 332 aaPredicted RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 MTHFRP42898 656 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 ITIH3Q06033 890 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 EGR3Q06889 387 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 HSP90AA2PQ14568 343 aaPredicted RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 PTPN14Q15678 1187 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 FAM187BQ17R55 369 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 USP41Q3LFD5 358 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 SPECC1Q5M775 1068 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 FAM171A1Q5VUB5 890 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 EEF1DP3Q658K8 133 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 ARL6IP4Q66PJ3 421 aaKnown RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 CDCA2Q69YH5 1023 aaPredicted RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 FUT10Q6P4F1 479 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 SYCE2Q6PIF2 218 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 UNC5AQ6ZN44 842 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 KCNK18Q7Z418 384 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 HSCBQ8IWL3 235 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 TARS2Q9BW92 718 aaKnown RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 ADAM7Q9H2U9 754 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 TOPORSQ9NS56 1045 aaPredicted RBP8.98□□□□□ -0.97
DNMT1-219ENST00000589349 SLAMF8Q9P0V8 285 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 KCNG1Q9UIX4 513 aa8.98□□□□□ -0.97
DNMT1-219ENST00000589349 B3GAT3O94766 335 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 PLS3P13797 630 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 RPL17P18621 184 aaKnown RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 LIG4P49917 911 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 ARPP19P56211 112 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 TUSC3Q13454 348 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 KARSQ15046 597 aaKnown RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 NT5DC1Q5TFE4 455 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 FAM173BQ6P4H8 233 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 C1orf186Q6ZWK4 172 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 ZNF655Q8N720 491 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 SYT2Q8N9I0 419 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 TDRD5Q8NAT2 981 aaKnown RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 NOC3LQ8WTT2 800 aaKnown RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 ASIC4Q96FT7 647 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 SHDQ96IW2 340 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 AK8Q96MA6 479 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 NECTIN4Q96NY8 510 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 ACAP3Q96P50 834 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 MMTAG2Q9BU76 263 aaKnown RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 HERC2P3Q9BVR0 1158 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 TIPINQ9BVW5 301 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 HDAC8Q9BY41 377 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 PANK2Q9BZ23 570 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 SFXN1Q9H9B4 322 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 MAN1C1Q9NR34 630 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 MARCH5Q9NX47 278 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 LARSQ9P2J5 1176 aaKnown RBP8.97□□□□□ -0.97
DNMT1-219ENST00000589349 DPP7Q9UHL4 492 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 ADAM28Q9UKQ2 775 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 NUB1Q9Y5A7 615 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 CLIC4Q9Y696 253 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 TTC28Q96AY4 2481 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 SF3B1O75533 1304 aaKnown RBP eCLIP8.97□□□□□ -0.976e-11■■■■■ 38.2
DNMT1-219ENST00000589349 PHLPP2Q6ZVD8 1323 aa8.97□□□□□ -0.97
DNMT1-219ENST00000589349 XIRP2A4UGR9 3374 aa8.96□□□□□ -0.97
DNMT1-219ENST00000589349 CCDC195A0A1B0GUA6 201 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms