RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 COPS2P61201 443 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 TSPY1Q01534 308 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 YWHAHQ04917 246 aaPredicted RBP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 IKBKEQ14164 716 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PIGZQ86VD9 579 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 EMC1Q8N766 993 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PNKPQ96T60 521 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 KRT12Q99456 494 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 LRRC1Q9BTT6 524 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 NRDE2Q9H7Z3 1164 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 KRT82Q9NSB4 513 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PTPRDP23468 1912 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 MYBPHLA2RUH7 354 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 CLDN5O00501 218 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 FSCN2O14926 492 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 LRCH4O75427 683 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 AP1G2O75843 785 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 GABBR2O75899 941 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 SLC25A11Q02978 314 aaKnown RBP12.66□□□□□ -0.38
CCBE1-203ENST00000589116 LRRC26Q2I0M4 334 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 DEFB128Q7Z7B8 93 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 RCOR2Q8IZ40 523 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 LRRC43Q8N309 656 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 RXFP2Q8WXD0 754 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 PIWIL1Q96J94 861 aaKnown RBP12.66□□□□□ -0.38
CCBE1-203ENST00000589116 RUNDC3BQ96NL0 473 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 COLEC11Q9BWP8 271 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 STIM2Q9P246 746 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 DNAJB4Q9UDY4 337 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 ADAM28Q9UKQ2 775 aa12.66□□□□□ -0.38
CCBE1-203ENST00000589116 PATJQ8NI35 1801 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 PIK3R2O00459 728 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 NRP1O14786 923 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 SART1O43290 800 aaKnown RBP12.65□□□□□ -0.38
CCBE1-203ENST00000589116 TADA2AO75478 443 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 FBXO21O94952 628 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 OAZ2O95190 189 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 PDGFRAP16234 1089 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 SDC4P31431 198 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 PTPN7P35236 360 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 FLT3P36888 993 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 PTPN9P43378 593 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 CLCN6P51797 869 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 ELAVL2Q12926 359 aaKnown RBP12.65□□□□□ -0.38
CCBE1-203ENST00000589116 CYP1B1Q16678 543 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 CCDC142Q17RM4 750 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 DAB2IPQ5VWQ8 1189 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 AADACL2Q6P093 401 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 C4orf50Q6ZRC1 276 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 MTERF4Q7Z6M4 381 aaKnown RBP12.65□□□□□ -0.38
CCBE1-203ENST00000589116 SCUBE3Q8IX30 993 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 KLHL7Q8IXQ5 586 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 C12orf50Q8NA57 414 aaPredicted RBP12.65□□□□□ -0.38
CCBE1-203ENST00000589116 HNRNPLLQ8WVV9 542 aaKnown RBP12.65□□□□□ -0.38
CCBE1-203ENST00000589116 CSNK1G1Q9HCP0 422 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 PNPLA8Q9NP80 782 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
CCBE1-203ENST00000589116 NLRC5Q86WI3 1866 aa12.65□□□□□ -0.38
CCBE1-203ENST00000589116 TMEM265A0A087WTH1 108 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ABHD14A-ACY1A0A1B0GW23 586 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 TBKBP1A7MCY6 615 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 F8W810 466 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 TNFRSF10AO00220 468 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 KIAA0355O15063 1070 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 HSF2BPO75031 334 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 EFCAB14O75071 495 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 PHF2O75151 1096 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 TIMP1P01033 207 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 KRT1P04264 644 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ALDH2P05091 517 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 GLI1P08151 1106 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 LCP1P13796 627 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 CHRNA3P32297 505 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 GJC1P36383 396 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 VSNL1P62760 191 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ADIGQ0VDE8 80 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 MAP9Q49MG5 647 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ODF2Q5BJF6 829 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 TMCO3Q6UWJ1 677 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 MAATS1Q7Z4T9 603 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 CCDC50Q8IVM0 306 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 SIX6OS1Q8N1H7 587 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 ARFGAP1Q8N6T3 406 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 OR10T2Q8NGX3 314 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 SMOQ99835 787 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 DDX47Q9H0S4 455 aaKnown RBP12.64□□□□□ -0.39
CCBE1-203ENST00000589116 CNGB3Q9NQW8 809 aa12.64□□□□□ -0.39
CCBE1-203ENST00000589116 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms