RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 NTMQ9P121 344 aa8.6□□□□□ -1.03
VMP1-208ENST00000588617 POGKQ9P215 609 aa8.6□□□□□ -1.03
VMP1-208ENST00000588617 DNAJB11Q9UBS4 358 aa8.6□□□□□ -1.03
VMP1-208ENST00000588617 CNTN6Q9UQ52 1028 aa8.6□□□□□ -1.03
VMP1-208ENST00000588617 DNAJC16Q9Y2G8 782 aa8.6□□□□□ -1.03
VMP1-208ENST00000588617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.59□□□□□ -1.03
VMP1-208ENST00000588617 SPTLC2O15270 562 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 PRSS23O95084 383 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 KRT20P35900 424 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 POLD2P49005 469 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 PXNP49023 591 aaPredicted RBP8.59□□□□□ -1.03
VMP1-208ENST00000588617 DGKEP52429 567 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 PTCHD3Q3KNS1 767 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 FAM133BQ5BKY9 247 aaKnown RBP8.59□□□□□ -1.03
VMP1-208ENST00000588617 CCDC129Q6ZRS4 1044 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 SPARTQ8N0X7 666 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 TXNDC5Q8NBS9 432 aaKnown RBP8.59□□□□□ -1.03
VMP1-208ENST00000588617 PSD4Q8NDX1 1056 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 SHCBP1Q8NEM2 672 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 DNAJB14Q8TBM8 379 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 RNF125Q96EQ8 232 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 LMAN2LQ9H0V9 348 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 UNKLQ9H9P5 680 aaKnown RBP8.59□□□□□ -1.03
VMP1-208ENST00000588617 FSCN3Q9NQT6 498 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 NSMCE4AQ9NXX6 385 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 MRPS17Q9Y2R5 130 aaKnown RBP8.59□□□□□ -1.03
VMP1-208ENST00000588617 CYP46A1Q9Y6A2 500 aa8.59□□□□□ -1.03
VMP1-208ENST00000588617 PI4KAP2A4QPH2 592 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 ZNF503-AS2A6NEH8 195 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 STX16-NPEPL1H3BU86 382 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 STX16O14662 325 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 DOK2O60496 412 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 TRIM13O60858 407 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 SEMA7AO75326 666 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 TAF5LO75529 589 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 LMNAP02545 664 aaKnown RBP8.58□□□□□ -1.04
VMP1-208ENST00000588617 FCER1AP12319 257 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 MYCLP12524 364 aaPredicted RBP8.58□□□□□ -1.04
VMP1-208ENST00000588617 HOXD12P35452 270 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 COPB2P35606 906 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 GCLCP48506 637 aaPredicted RBP8.58□□□□□ -1.04
VMP1-208ENST00000588617 ZNF134P52741 427 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 SLFN5Q08AF3 891 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 TAPT1Q6NXT6 567 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 TAF2Q6P1X5 1199 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 DOK3Q7L591 496 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 FAM83AQ86UY5 434 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 USP38Q8NB14 1042 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 ZMIZ2Q8NF64 920 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 HMGB4Q8WW32 186 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 ZNF512Q96ME7 567 aaPredicted RBP8.58□□□□□ -1.04
VMP1-208ENST00000588617 CPPED1Q9BRF8 314 aaPredicted RBP8.58□□□□□ -1.04
VMP1-208ENST00000588617 GCM1Q9NP62 436 aa8.58□□□□□ -1.04
VMP1-208ENST00000588617 TSPAN3O60637 253 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 RPP40O75818 363 aaKnown RBP8.57□□□□□ -1.04
VMP1-208ENST00000588617 TFRCP02786 760 aaKnown RBP8.57□□□□□ -1.04
VMP1-208ENST00000588617 CPA1P15085 419 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 KCNA3P22001 575 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 CHMP24386 653 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 YY1P25490 414 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 KCNC1P48547 511 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 CCR9P51686 369 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 LOXL3P58215 753 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 ZNF844Q08AG5 666 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 GALNT2Q10471 571 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 MYO1EQ12965 1108 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 ERV3-1Q14264 604 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 GALNTL6Q49A17 601 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 CTXN3Q4LDR2 81 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 FAM111BQ6SJ93 734 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 PRR23BQ6ZRT6 265 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 RINLQ6ZS11 566 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 R3HCC1LQ7Z5L2 792 aaKnown RBP8.57□□□□□ -1.04
VMP1-208ENST00000588617 KRT77Q7Z794 578 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.57□□□□□ -1.04
VMP1-208ENST00000588617 STAMQ92783 540 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 HIST1H2AAQ96QV6 131 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 TTPALQ9BTX7 342 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 CCDC68Q9H2F9 335 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 C12orf65Q9H3J6 166 aaKnown RBP8.57□□□□□ -1.04
VMP1-208ENST00000588617 NKIRAS2Q9NYR9 191 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 USP22Q9UPT9 525 aa8.57□□□□□ -1.04
VMP1-208ENST00000588617 PMS2P1A4D2B8 440 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 DRGXA6NNA5 263 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 BTBD11A6QL63 1104 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 KIF28PB7ZC32 967 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 CD3EAPO15446 510 aaKnown RBP8.56□□□□□ -1.04
VMP1-208ENST00000588617 TMEM63AO94886 807 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 HGFP14210 728 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 HK1P19367 917 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 ABCD3P28288 659 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 NTSR1P30989 418 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 MCM2P49736 904 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 DLG4P78352 724 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 DLX2Q07687 328 aaPredicted RBP8.56□□□□□ -1.04
VMP1-208ENST00000588617 PDCLQ13371 301 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 CSHL1Q14406 222 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 CCDC184Q52MB2 194 aa8.56□□□□□ -1.04
VMP1-208ENST00000588617 CFAP58Q5T655 872 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms