RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 HPDLQ96IR7 371 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 CD248Q9HCU0 757 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 CPQQ9Y646 472 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 F8VP50 259 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 TMEM191BP0C7N4 346 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 MRPS21P82921 87 aaKnown RBP14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 EMC10Q5UCC4 262 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 LARP1BQ659C4 914 aaKnown RBP14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 C4orf50Q6ZRC1 276 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 PIP4P1Q86T03 277 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 GPD1LQ8N335 351 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 TXNDC5Q8NBS9 432 aaKnown RBP14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 CCDC26Q8TAB7 109 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 MYCBPAPQ8TBZ2 947 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 C8orf48Q96LL4 319 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 MRPL45Q9BRJ2 306 aaKnown RBP14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 SCNM1Q9BWG6 230 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 DPEP3Q9H4B8 488 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 ZDHHC4Q9NPG8 344 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 SMPD4Q9NXE4 827 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 MAGEC2Q9UBF1 373 aaPredicted RBP14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 SMC3Q9UQE7 1217 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 MORC2Q9Y6X9 1032 aaPredicted RBP14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 CELSR3Q9NYQ7 3312 aa14.73□□□□□ -0.05
CLPTM1-208ENST00000588274 TNFRSF10BO14763 440 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 PRPF6O94906 941 aaKnown RBP14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 KAT7O95251 611 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 KLF8O95600 359 aaPredicted RBP14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 DHPSP49366 369 aaPredicted RBP14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 PDE6CP51160 858 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 RESTQ13127 1097 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 NR1H3Q13133 447 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 ALCAMQ13740 583 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 FAM173BQ6P4H8 233 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 DEFB124Q8NES8 71 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 HPS3Q969F9 1004 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 ZNF518BQ9C0D4 1074 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 TRPM5Q9NZQ8 1165 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 PCDHB13Q9Y5F0 798 aa14.72□□□□□ -0.05
CLPTM1-208ENST00000588274 SMG1Q96Q15 3661 aaKnown RBP14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 ATXN2Q99700 1313 aaKnown RBP14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 MYOFQ9NZM1 2061 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 TRIM66O15016 1216 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 TACC1O75410 805 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 CST3P01034 146 aaPredicted RBP14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 PDGFRBP09619 1106 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 GRIK1P39086 918 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 CYP27A1Q02318 531 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 MAPRE1Q15691 268 aaKnown RBP14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 HSF5Q4G112 596 aaPredicted RBP14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 TRIM61Q5EBN2 209 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 MDH1BQ5I0G3 518 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 RRAGBQ5VZM2 374 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 SLC23A3Q6PIS1 610 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 SV2BQ7L1I2 683 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 WDR49Q8IV35 697 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 TMEFF1Q8IYR6 380 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 WHAMMQ8TF30 809 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 PIGKQ92643 395 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 WBP2Q969T9 261 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 DUSP9Q99956 384 aaKnown RBP14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 PANK4Q9NVE7 773 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 CFAP97Q9P2B7 532 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 CCDC39Q9UFE4 941 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 PILRBQ9UKJ0 227 aa14.71□□□□□ -0.05
CLPTM1-208ENST00000588274 TMEM8BA6NDV4 472 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 SRRM3A6NNA2 597 aaPredicted RBP14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 KIAA0391O15091 583 aaKnown RBP14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 GREM1O60565 184 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 CAPNS1P04632 268 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 IDEP14735 1019 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 ENGP17813 658 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 TIE1P35590 1138 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 PPP3CCP48454 512 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 KDSRQ06136 332 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 TAF10Q12962 218 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 MYO1EQ12965 1108 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 SEMA3BQ13214 749 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 CUL4AQ13619 759 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 E2F4Q16254 413 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 ARMCX6Q7L4S7 300 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 EPM2AIP1Q7L775 607 aaPredicted RBP14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 TRAPPC11Q7Z392 1133 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 MIB1Q86YT6 1006 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 SYT12Q8IV01 421 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 SYCP3Q8IZU3 236 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 ANKRD36BP1Q96IX9 119 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 PNKPQ96T60 521 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 XYLT2Q9H1B5 865 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 FSCN3Q9NQT6 498 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 HSPBP1Q9NZL4 362 aa14.7□□□□□ -0.06
CLPTM1-208ENST00000588274 UPK3BL1B0FP48 263 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 UPK3BL2E5RIL1 263 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 CLDN5O00501 218 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 HOXC11O43248 304 aaPredicted RBP14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 TGFB1I1O43294 461 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 COCHO43405 550 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 HYAL3O43820 417 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms