RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 KRT85P78386 507 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 LMNB2Q03252 620 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 CEP135Q66GS9 1140 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 SPOPLQ6IQ16 392 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 PAQR9Q6ZVX9 377 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 FAM160A2Q8N612 972 aaPredicted RBP15.25■□□□□ 0.03
VMP1-206ENST00000587945 RPLP0P6Q8NHW5 317 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 HHIPQ96QV1 700 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 MED10Q9BTT4 135 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 EHD2Q9NZN4 543 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 USP25Q9UHP3 1055 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 ANTXRLA6NF34 631 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 PDXKO00764 312 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 NFATC1O95644 943 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 OAS1P00973 400 aaKnown RBP15.24■□□□□ 0.03
VMP1-206ENST00000587945 YWHAQP27348 245 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 SLC7A9P82251 487 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 NR1H3Q13133 447 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 C1orf220Q5T0J3 134 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 SV2AQ7L0J3 742 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 FILIP1Q7Z7B0 1213 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 ACOT1Q86TX2 421 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 FAM35AQ86V20 835 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 NUP93Q8N1F7 819 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 SCAMP5Q8TAC9 235 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 SLITRK1Q96PX8 696 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 SEMA4GQ9NTN9 838 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 CFAP97Q9P2B7 532 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 HMGXB4Q9UGU5 601 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 CHORDC1Q9UHD1 332 aaPredicted RBP15.24■□□□□ 0.03
VMP1-206ENST00000587945 CDV3Q9UKY7 258 aaKnown RBP15.24■□□□□ 0.03
VMP1-206ENST00000587945 MAPK8IP1Q9UQF2 711 aa15.24■□□□□ 0.03
VMP1-206ENST00000587945 PRR5-ARHGAP8B1AHC4 643 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 AXIN1O15169 862 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 OLFM2O95897 454 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 CCDC130P13994 396 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 PFKLP17858 780 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 OPRD1P41143 372 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 PPP3CCP48454 512 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 ARHGAP8P85298 464 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 GAB4Q2WGN9 574 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 ZACNQ401N2 412 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 FBXO43Q4G163 708 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 KBTBD6Q86V97 674 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 FUKQ8N0W3 1084 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 TMC2Q8TDI7 906 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 TMEM174Q8WUU8 243 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 GAB3Q8WWW8 586 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 FBXO32Q969P5 355 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 EXOC4Q96A65 974 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 GOLPH3LQ9H4A5 285 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 FRMD4BQ9Y2L6 1034 aa15.23■□□□□ 0.03
VMP1-206ENST00000587945 ATP8B3O60423 1300 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 FAM237AA0A1B0GTK4 181 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 DCDC2BA2VCK2 349 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 TNFRSF10BO14763 440 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 CALUO43852 315 aaPredicted RBP15.22■□□□□ 0.03
VMP1-206ENST00000587945 RPP40O75818 363 aaKnown RBP15.22■□□□□ 0.03
VMP1-206ENST00000587945 AP1G2O75843 785 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 BEST1O76090 585 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 RTN3O95197 1032 aaPredicted RBP15.22■□□□□ 0.03
VMP1-206ENST00000587945 HLA-DRAP01903 254 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 CYP17A1P05093 508 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 MYL1P05976 194 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 MBL2P11226 248 aaPredicted RBP15.22■□□□□ 0.03
VMP1-206ENST00000587945 PIK3CAP42336 1068 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 NDST1P52848 882 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 SLC5A3P53794 718 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 SEC13P55735 322 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 DPYDQ12882 1025 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 DMC1Q14565 340 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 CCDC6Q16204 474 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 SGSM1Q2NKQ1 1148 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 C12orf29Q8N999 325 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 TNIP3Q96KP6 325 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 GDPD2Q9HCC8 539 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 DMAP1Q9NPF5 467 aaPredicted RBP15.22■□□□□ 0.03
VMP1-206ENST00000587945 KRT82Q9NSB4 513 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 GMIPQ9P107 970 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 CACNA1AO00555 2505 aa15.22■□□□□ 0.03
VMP1-206ENST00000587945 KIF26AQ9ULI4 1882 aaPredicted RBP15.21■□□□□ 0.03
VMP1-206ENST00000587945 CCDC163A0A0D9SF12 145 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.21■□□□□ 0.03
VMP1-206ENST00000587945 K7EQS6 105 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 COCHO43405 550 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 GDF9O60383 454 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 LRP3O75074 770 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 AKAP3O75969 853 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 RHOBTB3O94955 611 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 ASS1P00966 412 aaKnown RBP15.21■□□□□ 0.03
VMP1-206ENST00000587945 TRIM49P0CI25 452 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 TRIM49CP0CI26 452 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 CCDC192P0DO97 292 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 P4HA1P13674 534 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 SDHBP21912 280 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 NR2F2P24468 414 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 ASPAP45381 313 aa15.21■□□□□ 0.03
VMP1-206ENST00000587945 SLC6A11P48066 632 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms