RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 TRPC3Q13507 836 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 THOC5Q13769 683 aaKnown RBP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 BMPR2Q13873 1038 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 RNF220Q5VTB9 566 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 CIAPIN1Q6FI81 312 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 THNSL1Q8IYQ7 743 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 PHC3Q8NDX5 983 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 CYTH2Q99418 400 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 PPP1R12CQ9BZL4 782 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 NIF3L1Q9GZT8 377 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 DHX33Q9H6R0 707 aaKnown RBP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 MYOZ2Q9NPC6 264 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 E7ESA3 106 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 H0YCG3 227 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 DKC1O60832 514 aaKnown RBP eCLIP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 TOP3BO95985 862 aaKnown RBP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 ENO1P06733 434 aaKnown RBP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 KRT19P08727 400 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 MIPP30301 263 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 HMGCS2P54868 508 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 ZNF200P98182 395 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 KLC1Q07866 573 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 HSF5Q4G112 596 aaPredicted RBP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 TREML1Q86YW5 311 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 CCDC33Q8N5R6 958 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 TEX9Q8N6V9 391 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 SSU72Q9NP77 194 aaKnown RBP17.6■□□□□ 0.41
CIRBP-212ENST00000587169 STOML1Q9UBI4 398 aa17.6■□□□□ 0.41
CIRBP-212ENST00000587169 SIGLEC16A6NMB1 481 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 TRIM49D1C9J1S8 452 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 LDHAP00338 332 aaKnown RBP17.59■□□□□ 0.41
CIRBP-212ENST00000587169 PTPN7P35236 360 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 SERPINB4P48594 390 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 NEK3P51956 506 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
CIRBP-212ENST00000587169 PDCD7Q8N8D1 485 aaKnown RBP17.59■□□□□ 0.41
CIRBP-212ENST00000587169 SHKBP1Q8TBC3 707 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 CAMKK2Q96RR4 588 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 HMGXB4Q9UGU5 601 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 H3BRJ5 948 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 LSM8O95777 96 aaKnown RBP17.59■□□□□ 0.41
CIRBP-212ENST00000587169 ERBB2P04626 1255 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 VHLP40337 213 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 CNTN2Q02246 1040 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 ENPEPQ07075 957 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 KBTBD2Q8IY47 623 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 PRPF31Q8WWY3 499 aaKnown RBP17.59■□□□□ 0.41
CIRBP-212ENST00000587169 OXNAD1Q96HP4 312 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-212ENST00000587169 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
CIRBP-212ENST00000587169 ASCC2Q9H1I8 757 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-212ENST00000587169 GRAP2O75791 330 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 PSMG1O95456 288 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 ACADSP16219 412 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 IRX4P78413 519 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 MAP3K10Q02779 954 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 KDSRQ06136 332 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 TMEM132BQ14DG7 1078 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 ZNF699Q32M78 642 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 SH2D5Q6ZV89 423 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 BRSK2Q8IWQ3 736 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 ZNF398Q8TD17 642 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 APOPT1Q96IL0 206 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 ACAP3Q96P50 834 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 PEBP4Q96S96 227 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 SRPK1Q96SB4 655 aaKnown RBP17.58■□□□□ 0.41
CIRBP-212ENST00000587169 ARHGEF4Q9NR80 690 aa17.58■□□□□ 0.41
CIRBP-212ENST00000587169 B2RBV5 119 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 GJB1P08034 283 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 DHRS4L1P0CG22 281 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 PGM1P36871 562 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 SMAD1Q15797 465 aaKnown RBP17.58■□□□□ 0.4
CIRBP-212ENST00000587169 CDO1Q16878 200 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 FKBP1CQ5VVH2 108 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 MICALL2Q8IY33 904 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 NIPA2Q8N8Q9 360 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 SLC44A1Q8WWI5 657 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 FAM136AQ96C01 138 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 FAM161BQ96MY7 647 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 TWNKQ96RR1 684 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 PPCSQ9HAB8 311 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.58■□□□□ 0.4
CIRBP-212ENST00000587169 IQANK1A0A1B0GTG1 560 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 SPATA31C2B4DYI2 1134 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 MCF2LO15068 1137 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 SMIM24O75264 130 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 ATG7O95352 703 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 PIGRP01833 764 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 EIF4BP23588 611 aaKnown RBP17.58■□□□□ 0.4
CIRBP-212ENST00000587169 ASPAP45381 313 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 HADHQ16836 314 aaKnown RBP17.58■□□□□ 0.4
CIRBP-212ENST00000587169 ZNF772Q68DY9 489 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-212ENST00000587169 CCDC62Q6P9F0 684 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 LRRC74BQ6ZQY2 392 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 ARID3BQ8IVW6 561 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-212ENST00000587169 LRRC71Q8N4P6 559 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 FAF2Q96CS3 445 aa17.58■□□□□ 0.4
CIRBP-212ENST00000587169 DDX50Q9BQ39 737 aaKnown RBP17.58■□□□□ 0.4
CIRBP-212ENST00000587169 RAB6BQ9NRW1 208 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms