RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 VDRP11473 427 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 GSPT1P15170 499 aaKnown RBP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 GYPEP15421 78 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 CNGA1P29973 690 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 EPHB1P54762 984 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 SART3Q15020 963 aaKnown RBP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 SNRNP48Q6IEG0 339 aaKnown RBP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 FAM160B2Q86V87 743 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 CPXCR1Q8N123 301 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 PCDH19Q8TAB3 1148 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 CHURC1Q8WUH1 139 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 ST8SIA2Q92186 375 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 MYEOVQ96EZ4 313 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 DEFB118Q96PH6 123 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 DEPDC7Q96QD5 511 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 NUP88Q99567 741 aaPredicted RBP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 ARPC5LQ9BPX5 153 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 MOV10L1Q9BXT6 1211 aaKnown RBP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 TEX13BQ9BXU2 312 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 ZNF700Q9H0M5 742 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 KAT14Q9H8E8 782 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 ARNT2Q9HBZ2 717 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 ARHGEF4Q9NR80 690 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 FBXO28Q9NVF7 368 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 FEM1BQ9UK73 627 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 CBLCQ9ULV8 474 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 LZTS1Q9Y250 596 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 R3HCC1Q9Y3T6 440 aaKnown RBP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 TRAF6Q9Y4K3 522 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 COL11A1P12107 1806 aaPredicted RBP5.34□□□□□ -1.55
ZNF540-204ENST00000586792 PARP14Q460N5 1801 aa5.34□□□□□ -1.55
ZNF540-204ENST00000586792 NEDD4P46934 1319 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 TMEM232C9JQI7 657 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 VWA5AO00534 786 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 FOXP2O15409 715 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 TSPAN6O43657 245 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 CNMDO75829 334 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 SCAF4O95104 1147 aaKnown RBP5.33□□□□□ -1.56
ZNF540-204ENST00000586792 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
ZNF540-204ENST00000586792 ADORA2AP29274 412 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 TRAPPC10P48553 1259 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 GRB14Q14449 540 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 KRT40Q6A162 431 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 ABRAQ8N0Z2 381 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 TEX19Q8NA77 164 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 U2AF1L4Q8WU68 220 aaKnown RBP5.33□□□□□ -1.56
ZNF540-204ENST00000586792 TRIB2Q92519 343 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 CHMP4CQ96CF2 233 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 TTC14Q96N46 770 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 HTATIP2Q9BUP3 242 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 RSPH9Q9H1X1 276 aaPredicted RBP5.33□□□□□ -1.56
ZNF540-204ENST00000586792 KCNH7Q9NS40 1196 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 SNTG2Q9NY99 539 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 FBXO40Q9UH90 709 aa5.33□□□□□ -1.56
ZNF540-204ENST00000586792 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.33□□□□□ -1.56
ZNF540-204ENST00000586792 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 B4E1Z4 1266 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 GOLGA6L22H0YM25 854 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 TBX3O15119 743 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 NMT2O60551 498 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 SGPL1O95470 568 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 JUNP05412 331 aaKnown RBP5.32□□□□□ -1.56
ZNF540-204ENST00000586792 VSIG10L2P0DP72 767 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 EN2P19622 333 aaPredicted RBP5.32□□□□□ -1.56
ZNF540-204ENST00000586792 CHMLP26374 656 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 MASP1P48740 699 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 OAZ1P54368 228 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 TMEM132BQ14DG7 1078 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 BMP2KLQ5H9B9 411 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 KIAA1755Q5JYT7 1200 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 GPATCH4Q5T3I0 446 aaKnown RBP5.32□□□□□ -1.56
ZNF540-204ENST00000586792 IFIT1BQ5T764 474 aaKnown RBP5.32□□□□□ -1.56
ZNF540-204ENST00000586792 KIAA0907Q7Z7F0 614 aaPredicted RBP5.32□□□□□ -1.56
ZNF540-204ENST00000586792 TBC1D10CQ8IV04 446 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 PLA2G15Q8NCC3 412 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 NCOA7Q8NI08 942 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 ANP32BQ92688 251 aaKnown RBP5.32□□□□□ -1.56
ZNF540-204ENST00000586792 SPATA5L1Q9BVQ7 753 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 SERHL2Q9H4I8 314 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 ACAD9Q9H845 621 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 SMURF1Q9HCE7 757 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 RAVER2Q9HCJ3 691 aaKnown RBP5.32□□□□□ -1.56
ZNF540-204ENST00000586792 TCP11L1Q9NUJ3 509 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 GJD2Q9UKL4 321 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 CCPG1Q9ULG6 757 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 CNPY2Q9Y2B0 182 aa5.32□□□□□ -1.56
ZNF540-204ENST00000586792 PFASO15067 1338 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 TNKSO95271 1327 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 FRMPD2Q68DX3 1309 aaPredicted RBP5.31□□□□□ -1.56
ZNF540-204ENST00000586792 CENPVL1A0A0U1RR11 272 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 ALG1L2C9J202 215 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 ATP2A1O14983 1001 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 HOXC6P09630 235 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 PARP1P09874 1014 aaKnown RBP5.31□□□□□ -1.56
ZNF540-204ENST00000586792 PDHBP11177 359 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 ALAS1P13196 640 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 ETFBP38117 255 aa5.31□□□□□ -1.56
ZNF540-204ENST00000586792 ANP32AP39687 249 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms