RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 RNF40O75150 1001 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 ATP2C2O75185 946 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 HSD17B3P37058 310 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 CCDC14Q49A88 953 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 KCNT1Q5JUK3 1230 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 SPDYCQ5MJ68 293 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 SPATA18Q8TC71 538 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 FBXO25Q8TCJ0 367 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 ART4Q93070 314 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 B3GNT5Q9BYG0 378 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 WHRNQ9P202 907 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 MTRF1LQ9UGC7 380 aaKnown RBP23.36■■□□□ 1.33
CIRBP-208ENST00000586548 FAN1Q9Y2M0 1017 aa23.36■■□□□ 1.33
CIRBP-208ENST00000586548 ARVCFO00192 962 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 LIASO43766 372 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 PPFIA2O75334 1257 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 ACAT1P24752 427 aaKnown RBP23.35■■□□□ 1.33
CIRBP-208ENST00000586548 SDC4P31431 198 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 DHX9Q08211 1270 aaKnown RBP23.35■■□□□ 1.33
CIRBP-208ENST00000586548 TUSC3Q13454 348 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 TAF5Q15542 800 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 C15orf59Q2T9L4 293 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-208ENST00000586548 RIN2Q8WYP3 895 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-208ENST00000586548 UROC1Q96N76 676 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 SEZ6LQ9BYH1 1024 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 TXLNGYQ9BZA5 131 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 RGS18Q9NS28 235 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 ASIC3Q9UHC3 531 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 NEU2Q9Y3R4 380 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 PTCH2Q9Y6C5 1203 aa23.35■■□□□ 1.33
CIRBP-208ENST00000586548 KBTBD13C9JR72 458 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 POMCP01189 267 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 PTPN9P43378 593 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 PLCB3Q01970 1234 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 CALCOCO2Q13137 446 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 UAP1Q16222 522 aaPredicted RBP23.34■■□□□ 1.33
CIRBP-208ENST00000586548 MDH1BQ5I0G3 518 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 LRIG3Q6UXM1 1119 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 GOLGA6L1Q8N7Z2 621 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 KCTD6Q8NC69 237 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 CFAP57Q96MR6 1250 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 PEBP4Q96S96 227 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 SYT15Q9BQS2 421 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 FRMD8P1Q9BZ68 369 aaPredicted RBP23.34■■□□□ 1.33
CIRBP-208ENST00000586548 VPS18Q9P253 973 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 TSC2P49815 1807 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 HTTP42858 3142 aa23.34■■□□□ 1.33
CIRBP-208ENST00000586548 PRPSAP2O60256 369 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 ODC1P11926 461 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 LCP1P13796 627 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 NPR3P17342 541 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 BYSLQ13895 437 aaKnown RBP23.33■■□□□ 1.33
CIRBP-208ENST00000586548 MBTPS1Q14703 1052 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 SH3PXD2AQ5TCZ1 1133 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 PAQR9Q6ZVX9 377 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 BBS12Q6ZW61 710 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 CYP4V2Q6ZWL3 525 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-208ENST00000586548 SNF8Q96H20 258 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 FAM118BQ9BPY3 351 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 PAAF1Q9BRP4 392 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.33■■□□□ 1.334e-7■■■■□ 22.1
CIRBP-208ENST00000586548 CDH9Q9ULB4 789 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 DRG1Q9Y295 367 aaKnown RBP23.33■■□□□ 1.33
CIRBP-208ENST00000586548 DNAH12Q6ZR08 3092 aa23.33■■□□□ 1.33
CIRBP-208ENST00000586548 GOLGA8KD6RF30 607 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 EOMESO95936 686 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 ITIH2P19823 946 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 IBSPP21815 317 aaPredicted RBP23.33■■□□□ 1.32
CIRBP-208ENST00000586548 CDO1Q16878 200 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 TIGD5Q53EQ6 642 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 KIAA0319Q5VV43 1072 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 ZNF365Q70YC5 407 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 PIGZQ86VD9 579 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 TTC13Q8NBP0 860 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 KCTD13Q8WZ19 329 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 HSPH1Q92598 858 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 CRTAC1Q9NQ79 661 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 PLAAQ9Y263 795 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 INPP5FQ9Y2H2 1132 aa23.33■■□□□ 1.32
CIRBP-208ENST00000586548 C9IYK1 514 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 ENDOD1O94919 500 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 IVDP26440 423 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 PCSK1P29120 753 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 ATP11AP98196 1134 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 CCDC142Q17RM4 750 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 BOLA3Q53S33 107 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 EFHC1Q5JVL4 640 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 CCDC89Q8N998 374 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 CLEC4CQ8WTT0 213 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 FAM172AQ8WUF8 416 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 UBLCP1Q8WVY7 318 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-208ENST00000586548 TEKT4Q8WW24 435 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 NKD2Q969F2 451 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-208ENST00000586548 TBCBQ99426 244 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 MED10Q9BTT4 135 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 DNPEPQ9ULA0 475 aa23.32■■□□□ 1.32
CIRBP-208ENST00000586548 CLDN5O00501 218 aa23.31■■□□□ 1.32
CIRBP-208ENST00000586548 CYP11A1P05108 521 aa23.31■■□□□ 1.32
CIRBP-208ENST00000586548 FAM200BP0CF97 657 aa23.31■■□□□ 1.32
CIRBP-208ENST00000586548 ATF2P15336 505 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms