RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SLC39A12Q504Y0 691 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 ZNF394Q53GI3 561 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 SGO2Q562F6 1265 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 VPS36Q86VN1 386 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 SIX5Q8N196 739 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 MYCBPAPQ8TBZ2 947 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 FUBP3Q96I24 572 aaKnown RBP eCLIP17.05■□□□□ 0.32
ATG4D-205ENST00000586477 HEXIM2Q96MH2 286 aaKnown RBP17.05■□□□□ 0.32
ATG4D-205ENST00000586477 ZSWIM3Q96MP5 696 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 IRF2BPLQ9H1B7 796 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 ZNF334Q9HCZ1 680 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-205ENST00000586477 ABCB6Q9NP58 842 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 AIPL1Q9NZN9 384 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 HSFX1Q9UBD0 423 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 WNT16Q9UBV4 365 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 USP34Q70CQ2 3546 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 OBSL1O75147 1896 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 NRDCO43847 1150 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 GFPT2O94808 682 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 MICAL2O94851 1124 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 CD19P15391 556 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 LMO2P25791 158 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 NUBP1P53384 320 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 GPC5P78333 572 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 ARID5BQ14865 1188 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 ASTLQ6HA08 431 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-205ENST00000586477 TANGO2Q6ICL3 276 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 ACOT1Q86TX2 421 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 SLC4A11Q8NBS3 891 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 SHKBP1Q8TBC3 707 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 WHAMMQ8TF30 809 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 ZNF512Q96ME7 567 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-205ENST00000586477 PHOX2BQ99453 314 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 DNAJC7Q99615 494 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 PKMYT1Q99640 499 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 GPR88Q9GZN0 384 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 ELOVL4Q9GZR5 314 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 GDE1Q9NZC3 331 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 HESX1Q9UBX0 185 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-205ENST00000586477 CA14Q9ULX7 337 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 CEP83Q9Y592 693 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 PTPRDP23468 1912 aa17.04■□□□□ 0.32
ATG4D-205ENST00000586477 CYP26A1O43174 497 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 MYL4P12829 197 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 ATF6P18850 670 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 ACAT1P24752 427 aaKnown RBP17.03■□□□□ 0.32
ATG4D-205ENST00000586477 ANXA13P27216 316 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 HNRNPH3P31942 346 aaKnown RBP17.03■□□□□ 0.32
ATG4D-205ENST00000586477 FAM78AQ5JUQ0 283 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 ARHGAP17Q68EM7 881 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 PPP1R2P3Q6NXS1 205 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 FAM171BQ6P995 826 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 MTSS1LQ765P7 747 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 PDZD4Q76G19 769 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-205ENST00000586477 SPATA2LQ8IUW3 424 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-205ENST00000586477 PANX2Q96RD6 677 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 ABHD10Q9NUJ1 306 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 HMGXB4Q9UGU5 601 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 FBXL21Q9UKT6 434 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 PCDHB5Q9Y5E4 795 aa17.03■□□□□ 0.32
ATG4D-205ENST00000586477 NUP210Q8TEM1 1887 aaPredicted RBP17.02■□□□□ 0.32
ATG4D-205ENST00000586477 THAP12O43422 761 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 ECI2O75521 394 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 SERPING1P05155 500 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 CYP11B1P15538 503 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 AOC1P19801 751 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 PRKCIP41743 596 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 CLCN5P51795 746 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 PSMC1P62191 440 aaKnown RBP17.02■□□□□ 0.32
ATG4D-205ENST00000586477 KLHL30Q0D2K2 578 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 TEAD2Q15562 447 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 MDH1BQ5I0G3 518 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 TRIM72Q6ZMU5 477 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 GAREM2Q75VX8 874 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 FLCNQ8NFG4 579 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 ATOH1Q92858 354 aaPredicted RBP17.02■□□□□ 0.32
ATG4D-205ENST00000586477 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 SMARCD1Q96GM5 515 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 CEP295NLQ96MC4 621 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 ASB16Q96NS5 453 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 TWNKQ96RR1 684 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 HNRNPABQ99729 332 aaKnown RBP17.02■□□□□ 0.32
ATG4D-205ENST00000586477 LPIN3Q9BQK8 851 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 ASAH2Q9NR71 780 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 GTF3C4Q9UKN8 822 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 NME7Q9Y5B8 376 aa17.02■□□□□ 0.32
ATG4D-205ENST00000586477 GREB1Q4ZG55 1949 aa17.02■□□□□ 0.31
ATG4D-205ENST00000586477 SHISA7A6NL88 538 aa17.01■□□□□ 0.31
ATG4D-205ENST00000586477 H0Y858 1186 aa17.01■□□□□ 0.31
ATG4D-205ENST00000586477 ZNF197O14709 1029 aa17.01■□□□□ 0.31
ATG4D-205ENST00000586477 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
ATG4D-205ENST00000586477 CLCN1P35523 988 aa17.01■□□□□ 0.31
ATG4D-205ENST00000586477 TUFMP49411 452 aaKnown RBP17.01■□□□□ 0.31
ATG4D-205ENST00000586477 SNX16P57768 344 aa17.01■□□□□ 0.31
ATG4D-205ENST00000586477 CYP27A1Q02318 531 aa17.01■□□□□ 0.31
ATG4D-205ENST00000586477 ARID5AQ03989 594 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms