RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 NOTUMQ6P988 496 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 CEP128Q6ZU80 1094 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 DENND5BQ6ZUT9 1274 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 GPR142Q7Z601 462 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 CLEC4CQ8WTT0 213 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 ERP27Q96DN0 273 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 FAM111AQ96PZ2 611 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 MAGEB5Q9BZ81 275 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 SDCBP2Q9H190 292 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 ECT2Q9H8V3 914 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 GOLGA4Q13439 2230 aaKnown RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 DNALI1O14645 258 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 UBOX5O94941 541 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 EIF4BP23588 611 aaKnown RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 RPL22P35268 128 aaKnown RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 PTK6Q13882 451 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 TRPM8Q7Z2W7 1104 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 CD302Q8IX05 232 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 MSL3Q8N5Y2 521 aaKnown RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 MCUR1Q96AQ8 359 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 TINF2Q9BSI4 451 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 IL1RAPL1Q9NZN1 696 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 TNFSF13BQ9Y275 285 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 hCG_1818297A0A087WSY0 165 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 A0A0G2JLL6 359 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 H0YGN5 161 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 M0QYT0 321 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 COPEO14579 308 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 B3GAT3O94766 335 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 CPA2P48052 419 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 MCL1Q07820 350 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 PTK7Q13308 1070 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 PRRT2Q7Z6L0 340 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 PCGF5Q86SE9 256 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 TLK2Q86UE8 772 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 DCLK2Q8N568 766 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 TRIM56Q9BRZ2 755 aaKnown RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 VPS11Q9H270 941 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 UBN1Q9NPG3 1134 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 PCMTD2Q9NV79 361 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 USP15Q9Y4E8 981 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-217ENST00000584582 NFS1Q9Y697 457 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 WNK3Q9BYP7 1800 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 TREHO43280 583 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 GAS2O43903 313 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 TAP1Q03518 808 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 ADIGQ0VDE8 80 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PPP1R2P3Q6NXS1 205 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PMF1Q6P1K2 205 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SPATS2Q86XZ4 545 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 HACE1Q8IYU2 909 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SLC4A11Q8NBS3 891 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PGBD4Q96DM1 585 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PAFAH2Q99487 392 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 CNPY3Q9BT09 278 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 UNKQ9C0B0 810 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PDZD7Q9H5P4 517 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 RSAD1Q9HA92 442 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 WDR35Q9P2L0 1181 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 TRIM33Q9UPN9 1127 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 ANKRD31Q8N7Z5 1873 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 CCT8L1PA6NM43 557 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 XPOTO43592 962 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 LSM8O95777 96 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SMPD1P17405 629 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 HNRNPH1P31943 449 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 ARL1P40616 181 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 ASPAP45381 313 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 POU5F1Q01860 360 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 NAA25Q14CX7 972 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SNCBQ16143 134 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 CNGA2Q16280 664 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 CCL14Q16627 93 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 EML3Q32P44 896 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 LGSNQ5TDP6 509 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PPIL6Q8IXY8 311 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 VCPIP1Q96JH7 1222 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SERPINB12Q96P63 405 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 GAD1Q99259 594 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SLC40A1Q9NP59 571 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SIX4Q9UIU6 781 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SBF2Q86WG5 1849 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 KBTBD13C9JR72 458 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 GOLGA8TH3BQL2 631 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 NCAM1P13591 858 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 LMO2P25791 158 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 RPA3P35244 121 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms