RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 VEPH1Q14D04 833 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 SPA17Q15506 151 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ASTE1Q2TB18 679 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-216ENST00000583804 C2CD6Q53TS8 623 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 NAA35Q5VZE5 725 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 PIGZQ86VD9 579 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 VPS36Q86VN1 386 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ELMOD1Q8N336 334 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 TMEM35BQ8NCS4 154 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ZMIZ2Q8NF64 920 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 CPA5Q8WXQ8 436 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-216ENST00000583804 APOL5Q9BWW9 433 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 LHX5Q9H2C1 402 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 CSNK1G1Q9HCP0 422 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ST7Q9NRC1 585 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 DZANK1Q9NVP4 752 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 CHORDC1Q9UHD1 332 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-216ENST00000583804 PCDHA13Q9Y5I0 950 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 PLXNA3P51805 1871 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 UQCRHLA0A096LP55 91 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 CCDC195A0A1B0GUA6 201 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 RCCD1A6NED2 376 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 EIF3CLB5ME19 914 aaKnown RBP11.55□□□□□ -0.56
TOP3A-216ENST00000583804 XPO1O14980 1071 aaKnown RBP11.55□□□□□ -0.56
TOP3A-216ENST00000583804 IPO7O95373 1038 aaKnown RBP11.55□□□□□ -0.56
TOP3A-216ENST00000583804 GLP2RO95838 553 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 ABL1P00519 1130 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 UQCRHP07919 91 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 CCDC175P0C221 793 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 ATF6P18850 670 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 GPD2P43304 727 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 MAGEA1P43355 309 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 SLC18A3Q16572 532 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 PKDCCQ504Y2 493 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 TMC5Q6UXY8 1006 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 TMEM184AQ6ZMB5 413 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 TRIM72Q6ZMU5 477 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 RTL10Q7L3V2 364 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 CCDC170Q8IYT3 715 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 CCAR2Q8N163 923 aaKnown RBP11.55□□□□□ -0.56
TOP3A-216ENST00000583804 NUP93Q8N1F7 819 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 C1orf131Q8NDD1 294 aaKnown RBP11.55□□□□□ -0.56
TOP3A-216ENST00000583804 STKLD1Q8NE28 680 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 MYRIPQ8NFW9 859 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 SLC35F5Q8WV83 523 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 PPP1R13BQ96KQ4 1090 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 NOX5Q96PH1 765 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 EIF3CQ99613 913 aaKnown RBP11.55□□□□□ -0.56
TOP3A-216ENST00000583804 SYT11Q9BT88 431 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 PIDD1Q9HB75 910 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 LRRC4Q9HBW1 653 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 MAGED2Q9UNF1 606 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-216ENST00000583804 ATG2AQ2TAZ0 1938 aa11.55□□□□□ -0.56
TOP3A-216ENST00000583804 TRANK1O15050 2925 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 SLC38A8A6NNN8 435 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 XYLBO75191 536 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 LSM8O95777 96 aaKnown RBP11.54□□□□□ -0.56
TOP3A-216ENST00000583804 HNRNPA1P09651 372 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3A-216ENST00000583804 LCP1P13796 627 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 PLA2G4AP47712 749 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 MTMR3Q13615 1198 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 RARS2Q5T160 578 aaKnown RBP11.54□□□□□ -0.56
TOP3A-216ENST00000583804 ANKRD54Q6NXT1 300 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 PMF1Q6P1K2 205 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 ALKBH5Q6P6C2 394 aaKnown RBP11.54□□□□□ -0.56
TOP3A-216ENST00000583804 DENND5BQ6ZUT9 1274 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 DNAJB7Q7Z6W7 309 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-216ENST00000583804 ITIH5Q86UX2 942 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 WDTC1Q8N5D0 677 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 SCAMP5Q8TAC9 235 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 PABPC5Q96DU9 382 aaKnown RBP11.54□□□□□ -0.56
TOP3A-216ENST00000583804 SPATA17Q96L03 361 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 PRKD2Q9BZL6 878 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 UBXN6Q9BZV1 441 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 SYNCQ9H7C4 482 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 SFXN1Q9H9B4 322 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 ZDHHC7Q9NXF8 308 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 MYO1AQ9UBC5 1043 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 CYTH4Q9UIA0 394 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
TOP3A-216ENST00000583804 HHLA1C9JL84 531 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 CSH1P0DML2 217 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 CSH2P0DML3 217 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 HOXB8P17481 243 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-216ENST00000583804 YWHAQP27348 245 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 HOXA9P31269 272 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 NSFP46459 744 aaKnown RBP11.53□□□□□ -0.56
TOP3A-216ENST00000583804 TKTL1P51854 596 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 SLC5A3P53794 718 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 NOMO3P69849 1222 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-216ENST00000583804 PDCLQ13371 301 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 CLUL1Q15846 466 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 CLEC16AQ2KHT3 1053 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 CTC1Q2NKJ3 1217 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
TOP3A-216ENST00000583804 GPRIN1Q7Z2K8 1008 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms