RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	CCNG1	P51959	295 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TGM3	Q08188	693 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	DYNC1I2	Q13409	638 aa	Known RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	NECAB2	Q7Z6G3	386 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TRPM5	Q9NZQ8	1165 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CNTNAP2	Q9UHC6	1331 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	PLXNC1	O60486	1568 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CTTNBP2	Q8WZ74	1663 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	PFAS	O15067	1338 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	DPEP1	P16444	411 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CCNI	Q14094	377 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CYP4Z1	Q86W10	505 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	PALB2	Q86YC2	1186 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	GLMN	Q92990	594 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	SH3GL3	Q99963	347 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TUFT1	Q9NNX1	390 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TMEM2	Q9UHN6	1383 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	MSRA	Q9UJ68	235 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	FAM135B	Q49AJ0	1406 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	C19orf81	C9J6K1	198 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CNP	P09543	421 aa	Known RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	EPHA7	Q15375	998 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CLEC4G	Q6UXB4	293 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	PARG	Q86W56	976 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	UNC45B	Q8IWX7	931 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	PIK3R5	Q8WYR1	880 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	MYOC	Q99972	504 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	MYLK2	Q9H1R3	596 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	GOLPH3	Q9H4A6	298 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	HNRNPR	O43390	633 aa	Known RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	SPR	P35270	261 aa	Predicted RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	HSPA9	P38646	679 aa	Known RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TCEAL5	Q5H9L2	206 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CCNT2	O60583	730 aa	Known RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	ALB	P02768	609 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TCEA1	P23193	301 aa	Known RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	XRCC4	Q13426	336 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	NCF4	Q15080	339 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	ZSWIM7	Q19AV6	140 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	PPM1L	Q5SGD2	360 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	IQCF2	Q8IXL9	164 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	LY9	Q9HBG7	655 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TLR8	Q9NR97	1041 aa	Known RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	TBC1D3B	A6NDS4	549 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	ANKRD13A	Q8IZ07	590 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	CDK20	Q8IZL9	346 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	REEP2	Q9BRK0	252 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	AVEN	Q9NQS1	362 aa	Predicted RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	GPN3	Q9UHW5	284 aa	Predicted RBP	11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	HPS5	Q9UPZ3	1129 aa		11.68	□□□□□ -0.54
MSI2-217	ENST00000583705	ERI2	A8K979	691 aa	Known RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	KRT16	P08779	473 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	ATP6V1B2	P21281	511 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	EFHC1	Q5JVL4	640 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	ATL2	Q8NHH9	583 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	BBS4	Q96RK4	519 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	EPC1	Q9H2F5	836 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	GPSM3	Q9Y4H4	160 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	DGAT1	O75907	488 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	KRT75	O95678	551 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	HLA-DRA	P01903	254 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	EZH2	Q15910	746 aa	Known RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	FAM124A	Q86V42	546 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	CERK	Q8TCT0	537 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	UBE2Q2	Q8WVN8	375 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	RBBP8	Q99708	897 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	FAM83E	Q2M2I3	478 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	LRRC8D	Q7L1W4	858 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	PPP1R13L	Q8WUF5	828 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	CGRRF1	Q99675	332 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	TRIT1	Q9H3H1	467 aa	Known RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	KPNA3	O00505	521 aa	Predicted RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	EYA4	O95677	639 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	FGR	P09769	529 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	LBP	P18428	481 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	EPHX2	P34913	555 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	PLD1	Q13393	1074 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	EDRF1	Q3B7T1	1238 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	ENGASE	Q8NFI3	743 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	GMCL1	Q96IK5	515 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	IARS2	Q9NSE4	1012 aa	Known RBP	11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	HBP1	O60381	514 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	REST	Q13127	1097 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	BIK	Q13323	160 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	CAMK1	Q14012	370 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	ZNF333	Q96JL9	665 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	AASDHPPT	Q9NRN7	309 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	ATP6V1B1	P15313	513 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	THOP1	P52888	689 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	C2CD6	Q53TS8	623 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	ADGRF2	Q8IZF7	708 aa		11.67	□□□□□ -0.54
MSI2-217	ENST00000583705	UTP15	Q8TED0	518 aa	Known RBP	11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms