RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 PVALEFA0A1B0GWK0 134 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SLC9A3R1O14745 358 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GDF9O60383 454 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RHOBTB1O94844 696 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RTN3O95197 1032 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 OLFM2O95897 454 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 OAS1P00973 400 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ADRB1P08588 477 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 P4HA1P13674 534 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PTPN1P18031 435 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DGKEP52429 567 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 AP3M2P53677 418 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SEC13P55735 322 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MYL6P60660 151 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SLC7A9P82251 487 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 EHHADHQ08426 723 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TAF10Q12962 218 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CUL4BQ13620 913 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SF3A2Q15428 464 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CCDC6Q16204 474 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KNOP1Q1ED39 458 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 LIMS2Q7Z4I7 341 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FILIP1Q7Z7B0 1213 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FAM35AQ86V20 835 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KBTBD6Q86V97 674 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 C11orf74Q86VG3 221 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 NUP93Q8N1F7 819 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FBXO32Q969P5 355 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SMARCD1Q96GM5 515 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TNIP3Q96KP6 325 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TPSD1Q9BZJ3 242 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 NACA2Q9H009 215 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SMYD3Q9H7B4 428 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DMAP1Q9NPF5 467 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZDHHC9Q9Y397 364 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SH3BP1Q9Y3L3 701 aa9.26□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZNF292O60281 2723 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZNF840PA6NDX5 716 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 LRRIQ3A6PVS8 624 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CLDN5O00501 218 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SCAMP3O14828 347 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ADH1CP00326 375 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CYP17A1P05093 508 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FAM163BP0C2L3 166 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 YWHAQP27348 245 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 EIF2DP41214 584 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RAP1GAPP47736 663 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CASP4P49662 377 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 LIMK1P53667 647 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SLC5A3P53794 718 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CACNA2D1P54289 1103 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 NCOA4Q13772 614 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 C2orf27AQ580R0 203 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 RESP18Q5W5W9 173 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ANO7Q6IWH7 933 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TTC30AQ86WT1 665 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KIAA1958Q8N8K9 716 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 OVCA2Q8WZ82 227 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 EZH1Q92800 747 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CCDC47Q96A33 483 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZC3H10Q96K80 434 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SPACA7Q96KW9 195 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CNTNAP3BQ96NU0 1288 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 EDEM2Q9BV94 578 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CNTNAP3Q9BZ76 1288 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 IMPG2Q9BZV3 1241 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 XYLT2Q9H1B5 865 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 VRTNQ9H8Y1 702 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 VPS45Q9NRW7 570 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KRT82Q9NSB4 513 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CFAP97Q9P2B7 532 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TBC1D14Q9P2M4 693 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 EBF1Q9UH73 591 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PCDHA7Q9UN72 937 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 NME7Q9Y5B8 376 aa9.25□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PTPRZ1P23471 2315 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ALDH1A2O94788 518 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KIF20AO95235 890 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 APODP05090 189 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZNF806P0C7X5 589 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ADH5P11766 374 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 OPRD1P41143 372 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PIK3CAP42336 1068 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KRT85P78386 507 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MRPS21P82921 87 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZXDBP98169 803 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CREB5Q02930 508 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KDSRQ06136 332 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DHCR24Q15392 516 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PLK5Q496M5 336 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 USP39Q53GS9 565 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 BTBD8Q5XKL5 378 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CEP135Q66GS9 1140 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GRAMD1CQ8IYS0 662 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 KIAA0895Q8NCT3 520 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 USP33Q8TEY7 942 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CNOT6LQ96LI5 555 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PNKPQ96T60 521 aa9.24□□□□□ -0.93
CDK5RAP3-229ENST00000583697 B3GNT5Q9BYG0 378 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms