RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CAPN11Q9UMQ6 739 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 CEP83Q9Y592 693 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 A0A1W2PRU2 124 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 FAM92AA1XBS5 289 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 LRRC53A6NM62 1247 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 F11P03951 625 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 GPD2P43304 727 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 KIF11P52732 1056 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 ARHGAP15Q53QZ3 475 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 RAB41Q5JT25 222 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 SFMBT2Q5VUG0 894 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 DENND1BQ6P3S1 775 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 GAREM2Q75VX8 874 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 GET4Q7L5D6 327 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-213ENST00000582230 NOP9Q86U38 636 aaKnown RBP21.15■□□□□ 0.98
TOP3A-213ENST00000582230 ADHFE1Q8IWW8 467 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 PDZD8Q8NEN9 1154 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 SCAMP5Q8TAC9 235 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 EPS8L1Q8TE68 723 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 STK32AQ8WU08 396 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 DDX1Q92499 740 aaKnown RBP21.15■□□□□ 0.98
TOP3A-213ENST00000582230 TCEAL4Q96EI5 215 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 HSFY1Q96LI6 401 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 PDCL3Q9H2J4 239 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 LRRC4Q9HBW1 653 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 GDE1Q9NZC3 331 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 AIPL1Q9NZN9 384 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 ZMYM5Q9UJ78 669 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 CDH7Q9ULB5 785 aa21.15■□□□□ 0.98
TOP3A-213ENST00000582230 LUC7L2Q9Y383 392 aaKnown RBP21.15■□□□□ 0.98
TOP3A-213ENST00000582230 PTPRDP23468 1912 aa21.14■□□□□ 0.98
TOP3A-213ENST00000582230 SOBPA7XYQ1 873 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 MOSPD3O75425 235 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 GBP2P32456 591 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-213ENST00000582230 SSTR3P32745 418 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-213ENST00000582230 ZBED6P86452 979 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 ARID5AQ03989 594 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 IFRD2Q12894 506 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-213ENST00000582230 TAF10Q12962 218 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 TJAP1Q5JTD0 557 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 GPRIN1Q7Z2K8 1008 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 TMEM150AQ86TG1 271 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 SHKBP1Q8TBC3 707 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 MRPS31Q92665 395 aaKnown RBP21.14■□□□□ 0.97
TOP3A-213ENST00000582230 SYN2Q92777 582 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-213ENST00000582230 FGF13Q92913 245 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 FBXO32Q969P5 355 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 MRFAP1L1Q96HT8 127 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 TRPM5Q9NZQ8 1165 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 NOCTQ9UK39 431 aaKnown RBP21.14■□□□□ 0.97
TOP3A-213ENST00000582230 SCML2Q9UQR0 700 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 USP3Q9Y6I4 520 aa21.14■□□□□ 0.97
TOP3A-213ENST00000582230 BRWD1Q9NSI6 2320 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 NCANO14594 1321 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 TULP2O00295 520 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 GYPCP04921 128 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 CFHP08603 1231 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 CEBPBP17676 345 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 DDX6P26196 483 aaKnown RBP eCLIP21.13■□□□□ 0.97
TOP3A-213ENST00000582230 ZNF75DP51815 510 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 CDR2Q01850 454 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 PMF1Q6P1K2 205 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 IRF2BP2Q7Z5L9 587 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 NPAS3Q8IXF0 933 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 PLCD3Q8N3E9 789 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 TDRD5Q8NAT2 981 aaKnown RBP21.13■□□□□ 0.97
TOP3A-213ENST00000582230 CPLX3Q8WVH0 158 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 ING5Q8WYH8 240 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 RPGRIP1Q96KN7 1286 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 NOX5Q96PH1 765 aa21.13■□□□□ 0.97
TOP3A-213ENST00000582230 LSM8O95777 96 aaKnown RBP21.12■□□□□ 0.97
TOP3A-213ENST00000582230 TPM1P09493 284 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 LAMP2P13473 410 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 GJA1P17302 382 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 ACADSBP45954 432 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 RPL34P49207 117 aaKnown RBP21.12■□□□□ 0.97
TOP3A-213ENST00000582230 TKTL1P51854 596 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 TEAD2Q15562 447 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 ASIC2Q16515 512 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 TAF3Q5VWG9 929 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 CCDC186Q7Z3E2 898 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 TMEM35BQ8NCS4 154 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 MYADMQ96S97 322 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 TASP1Q9H6P5 420 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 CYLDQ9NQC7 956 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 EPS15L1Q9UBC2 864 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 COL6A3P12111 3177 aa21.12■□□□□ 0.97
TOP3A-213ENST00000582230 ZNF840PA6NDX5 716 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 TADA3O75528 432 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 MMEP08473 750 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 CASP14P31944 242 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 CDH5P33151 784 aaPredicted RBP21.11■□□□□ 0.97
TOP3A-213ENST00000582230 SNX16P57768 344 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 ZP2Q05996 745 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 GPR158Q5T848 1215 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 SNX30Q5VWJ9 437 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 PM20D1Q6GTS8 502 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 TRIM72Q6ZMU5 477 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 MON1AQ86VX9 555 aa21.11■□□□□ 0.97
TOP3A-213ENST00000582230 PASD1Q8IV76 773 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms