RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 IFRD2Q12894 506 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-220ENST00000581707 CBWD6Q4V339 395 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 CBWD3Q5JTY5 395 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 CBWD5Q5RIA9 395 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 FILIP1Q7Z7B0 1213 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 TTC16Q8NEE8 873 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 NELFBQ8WX92 580 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 DUSP9Q99956 384 aaKnown RBP20.68■□□□□ 0.9
SREBF1-220ENST00000581707 DNAI2Q9GZS0 605 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 LMAN1LQ9HAT1 526 aa20.68■□□□□ 0.9
SREBF1-220ENST00000581707 METTL14Q9HCE5 456 aaKnown RBP20.68■□□□□ 0.9
SREBF1-220ENST00000581707 MYO15AQ9UKN7 3530 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 PROB1E7EW31 1015 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 TNFRSF10BO14763 440 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 LAMTOR5O43504 91 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 MTF1Q14872 753 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 TRIM68Q6AZZ1 485 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 TTI2Q6NXR4 508 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 FRMD5Q7Z6J6 570 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 SCAMP5Q8TAC9 235 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 SH3RF2Q8TEC5 729 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 WHAMMQ8TF30 809 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 FBXO32Q969P5 355 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 SLC35C1Q96A29 364 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 CYFIP2Q96F07 1278 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 HNRNPABQ99729 332 aaKnown RBP20.67■□□□□ 0.9
SREBF1-220ENST00000581707 SMOQ99835 787 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 EBF3Q9H4W6 596 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 CSNK1G1Q9HCP0 422 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 IL37Q9NZH6 218 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 ARHGAP26Q9UNA1 814 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 COQ4Q9Y3A0 265 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 PATJQ8NI35 1801 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 VPS13AQ96RL7 3174 aa20.67■□□□□ 0.9
SREBF1-220ENST00000581707 BICDL2A1A5D9 508 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 BEST1O76090 585 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 SP9P0CG40 484 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 ADORA2BP29275 332 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 SLC5A3P53794 718 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 MAP3K7CLP57077 242 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 USP4Q13107 963 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 RUNX3Q13761 415 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 PDGFRLQ15198 375 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 ZNF77Q15935 545 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 CAMK4Q16566 473 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 FOXR2Q6PJQ5 311 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 TXNDC11Q6PKC3 985 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 MAML2Q8IZL2 1156 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-220ENST00000581707 TTC39CQ8N584 583 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 PDZD8Q8NEN9 1154 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 ZMIZ2Q8NF64 920 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 OVCA2Q8WZ82 227 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 TATDN2Q93075 761 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 RNF38Q9H0F5 515 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 HPS4Q9NQG7 708 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 COMMD8Q9NX08 183 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 CTNND2Q9UQB3 1225 aa20.66■□□□□ 0.9
SREBF1-220ENST00000581707 HELZP42694 1942 aaKnown RBP20.66■□□□□ 0.9
SREBF1-220ENST00000581707 FAM200BP0CF97 657 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 CHRNB1P11230 501 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 ARSAP15289 507 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 TCF3P15923 654 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 CCDC40Q4G0X9 1142 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 ZNF394Q53GI3 561 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 TRIML1Q8N9V2 468 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 OSCP1Q8WVF1 389 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 CHRDQ9H2X0 955 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 CISHQ9NSE2 258 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 DUS2Q9NX74 493 aaKnown RBP20.65■□□□□ 0.9
SREBF1-220ENST00000581707 KIAA1468Q9P260 1216 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 CHORDC1Q9UHD1 332 aaPredicted RBP20.65■□□□□ 0.9
SREBF1-220ENST00000581707 USP34Q70CQ2 3546 aa20.65■□□□□ 0.9
SREBF1-220ENST00000581707 OTOL1A6NHN0 477 aaPredicted RBP20.64■□□□□ 0.89
SREBF1-220ENST00000581707 OAS1P00973 400 aaKnown RBP20.64■□□□□ 0.89
SREBF1-220ENST00000581707 STX17P56962 302 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 SLC7A9P82251 487 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 MTAPQ13126 283 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 PAK1Q13153 545 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 PON2Q15165 354 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 HEXIM2Q96MH2 286 aaKnown RBP20.64■□□□□ 0.89
SREBF1-220ENST00000581707 ARID3AQ99856 593 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 FAM124BQ9H5Z6 455 aaPredicted RBP20.64■□□□□ 0.89
SREBF1-220ENST00000581707 FBXO4Q9UKT5 387 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 WNT6Q9Y6F9 365 aa20.64■□□□□ 0.89
SREBF1-220ENST00000581707 DMDP11532 3685 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 FAM92AA1XBS5 289 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 LEFTY2O00292 366 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 OLFM2O95897 454 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 IFNAR2P48551 515 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 FMO5P49326 533 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 ZXDBP98169 803 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 CSTF1Q05048 431 aaKnown RBP20.63■□□□□ 0.89
SREBF1-220ENST00000581707 LRRC32Q14392 662 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 CLEC20AQ6ZU45 233 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 IER2Q9BTL4 223 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 FBXO44Q9H4M3 255 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 CPQQ9Y646 472 aa20.63■□□□□ 0.89
SREBF1-220ENST00000581707 GFRA3O60609 400 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 RAD23BP54727 409 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 AMPD2Q01433 879 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms