RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 ANXA13P27216 316 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 GTF2H1P32780 548 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 PIK3CAP42336 1068 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 KPNA1P52294 538 aaPredicted RBP11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 SLC7A9P82251 487 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 CSTF1Q05048 431 aaKnown RBP11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 TAF10Q12962 218 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 RUNX3Q13761 415 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 PON2Q15165 354 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 GAB4Q2WGN9 574 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 EML3Q32P44 896 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 ANKRD40Q6AI12 368 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 Q6ZS52 159 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 UNC93AQ86WB7 457 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 ADSSL1Q8N142 457 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 C12orf29Q8N999 325 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 SUMF1Q8NBK3 374 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 OSCP1Q8WVF1 389 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 TNIP3Q96KP6 325 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 SMOQ99835 787 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 SEMA4AQ9H3S1 761 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 TMEM8AQ9HCN3 771 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 CSNK1G1Q9HCP0 422 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 TRPC7Q9HCX4 862 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 RMND1Q9NWS8 449 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 C2orf42Q9NWW7 574 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 THG1LQ9NWX6 298 aaKnown RBP11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 PLXND1Q9Y4D7 1925 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 NUP205Q92621 2012 aa11.25□□□□□ -0.61
SUPT4H1-204ENST00000580947 TRIM49BA6NDI0 452 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 K7ESF4 209 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 TRDMT1O14717 391 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 PAPSS2O95340 614 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 HDCP19113 662 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 PPP3CCP48454 512 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 PGFP49763 221 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 SATB1Q01826 763 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 PDGFRLQ15198 375 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 TMEM196Q5HYL7 178 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 SNX30Q5VWJ9 437 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 FSTL4Q6MZW2 842 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 NUP93Q8N1F7 819 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 SPEM1Q8N4L4 309 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 SCAMP5Q8TAC9 235 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 SLC2A14Q8TDB8 520 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 SH3RF2Q8TEC5 729 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 EZH1Q92800 747 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 SMARCD1Q96GM5 515 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 CYP3A43Q9HB55 503 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 FBRSL1Q9HCM7 1045 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 DMAP1Q9NPF5 467 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 KRT82Q9NSB4 513 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 TRPM5Q9NZQ8 1165 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 COQ4Q9Y3A0 265 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 PCDHGA2Q9Y5H1 932 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 WNT6Q9Y6F9 365 aa11.24□□□□□ -0.61
SUPT4H1-204ENST00000580947 CEP192Q8TEP8 1941 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 ABCA7Q8IZY2 2146 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 GOLGA6L4A6NEF3 574 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 HHLA1C9JL84 531 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CETN3O15182 167 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 SLC16A3O15427 465 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CILPO75339 1184 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 AP1G2O75843 785 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 LMNAP02545 664 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 KRT13P13646 458 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 P4HA1P13674 534 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 HOXC13P31276 330 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 GJA4P35212 333 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 SLC5A3P53794 718 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 LRRC32Q14392 662 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CBWD6Q4V339 395 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CBWD3Q5JTY5 395 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 DGKKQ5KSL6 1271 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CBWD5Q5RIA9 395 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 KRT39Q6A163 491 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 PKN3Q6P5Z2 889 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 ZC3H14Q6PJT7 736 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 GPRIN1Q7Z2K8 1008 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 SYNPOQ8N3V7 929 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 KIAA1958Q8N8K9 716 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 OVCA2Q8WZ82 227 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 SMARCE1Q969G3 411 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CCDC34Q96HJ3 373 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 HNRNPABQ99729 332 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 LINC00597Q9H2U6 94 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 ECT2Q9H8V3 914 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 MAN1B1Q9UKM7 699 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 ATP8B3O60423 1300 aa11.23□□□□□ -0.61
SUPT4H1-204ENST00000580947 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms