RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 COILP38432 576 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PTGIRP43119 386 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TNNT3P45378 269 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KCNJ1P48048 391 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CACNA2D1P54289 1103 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MAP3K7CLP57077 242 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ADCY2Q08462 1091 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAAP100Q0VG06 881 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DHX34Q14147 1143 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CCDC14Q49A88 953 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DCLRE1AQ6PJP8 1040 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SPOCD1Q6ZMY3 1216 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SLC26A9Q7LBE3 791 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 JAMLQ86YT9 394 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ZDHHC17Q8IUH5 632 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MYLPFQ96A32 169 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TMEM209Q96SK2 561 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RHOBTB2Q9BYZ6 727 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ASNSD1Q9NWL6 643 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DDX56Q9NY93 547 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PRG3Q9Y2Y8 225 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 AP1G2O75843 785 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RNF8O76064 485 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ACADSBP45954 432 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 OR1G1P47890 313 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 EPHB4P54760 987 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SNX16P57768 344 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ATP11AP98196 1134 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TLE2Q04725 743 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RNASELQ05823 741 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HADHQ16836 314 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KAZNQ674X7 775 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CYP4V2Q6ZWL3 525 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 METTL23Q86XA0 190 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RCOR2Q8IZ40 523 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 OR10T2Q8NGX3 314 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MYCBPAPQ8TBZ2 947 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM118BQ9BPY3 351 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DPH5Q9H2P9 285 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ELAC1Q9H777 363 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HCSTQ9UBK5 93 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PCYOX1Q9UHG3 505 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 USP18Q9UMW8 372 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 hCG_1818297A0A087WSY0 165 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 C3orf70A6NLC5 250 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MAP2K7O14733 419 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KRT7P08729 469 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TFE3P19532 575 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ECHS1P30084 290 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CYP2C18P33260 490 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FNTAP49354 379 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SLC8A3P57103 927 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ADCY1Q08828 1119 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SNX1Q13596 522 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CASP8Q14790 479 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ACAP1Q15027 740 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 INTS6LQ5JSJ4 861 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 OVOS1Q6IE37 1185 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ZMIZ2Q8NF64 920 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SPATA18Q8TC71 538 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MAIP1Q8WWC4 291 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 NDRG1Q92597 394 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 APBB2Q92870 758 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SMOQ99835 787 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TRIM31Q9BZY9 425 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DCLK3Q9C098 648 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 LRRC19Q9H756 370 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 NGRNQ9NPE2 291 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DSEQ9UL01 958 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 LTBP2Q14767 1821 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DAPK3O43293 454 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ATP8B1O43520 1251 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TRUB2O95900 331 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SDC4P31431 198 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PCK1P35558 622 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CDKN2BP42772 138 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 BCAR1P56945 870 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ODF2Q5BJF6 829 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 GPRIN1Q7Z2K8 1008 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HDXQ7Z353 690 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CCDC105Q8IYK2 499 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ABI1Q8IZP0 508 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM172AQ8WUF8 416 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HSPH1Q92598 858 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PKMYT1Q99640 499 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ACBD6Q9BR61 282 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ADAM33Q9BZ11 813 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 NEUROG2Q9H2A3 272 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TMLHEQ9NVH6 421 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KANSL3Q9P2N6 904 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 UTP11Q9Y3A2 253 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PCDHB7Q9Y5E2 793 aa15.55■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM187AA6NFU0 413 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DCDC2CA8MYV0 355 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TMEM189-UBE2V1I3L0A0 370 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CXCL10P02778 98 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CD48P09326 243 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms