RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CRTAC1Q9NQ79 661 aa13.34□□□□□ -0.27
CDK5RAP3-217ENST00000580287 CEP83Q9Y592 693 aa13.34□□□□□ -0.27
CDK5RAP3-217ENST00000580287 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 E5RJQ4 531 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GABRDO14764 452 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DSC1Q08554 894 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SCUBE3Q8IX30 993 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MICALL1Q8N3F8 863 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TOP6BLQ8N6T0 577 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 UBLCP1Q8WVY7 318 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RSPH1Q8WYR4 309 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MAGOHBQ96A72 148 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MCEEQ96PE7 176 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LHX5Q9H2C1 402 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GEMIN8Q9NWZ8 242 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LSM8O95777 96 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RAG1P15918 1043 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PTPN1P18031 435 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CDH5P33151 784 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 OGDHQ02218 1023 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PAQR9Q6ZVX9 377 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SUGP1Q8IWZ8 645 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FUKQ8N0W3 1084 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CRYBG2Q8N1P7 616 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 URGCPQ8TCY9 931 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NDRG1Q92597 394 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MIS12Q9H081 205 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TMEM30AQ9NV96 361 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 USTQ9Y2C2 406 aa13.33□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GOLGA8KD6RF30 607 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 OR4Q2P0C623 313 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TCF4P15884 667 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 WARSP23381 471 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GJC1P36383 396 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CACNA2D1P54289 1103 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RWDD2BP57060 319 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DEFB103AP81534 67 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SF3A3Q12874 501 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■■□□ 15.1
CDK5RAP3-217ENST00000580287 LIN9Q5TKA1 542 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PLEKHA7Q6IQ23 1121 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 JOSD2Q8TAC2 188 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PDCD11Q14690 1871 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TCRBV7S2A1N4TA0A589 114 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MYO1FO00160 1098 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NRP1O14786 923 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MTA2O94776 668 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RFC1P35251 1148 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PEX5P50542 639 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PKDCCQ504Y2 493 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DCLRE1AQ6PJP8 1040 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LRRTM3Q86VH5 581 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KCNK16Q96T55 309 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TMLHEQ9NVH6 421 aa13.32□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TCRBV5S1A1TA0A578 114 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 EIF3HO15372 352 aaKnown RBP eCLIP13.31□□□□□ -0.282e-7■■□□□ 11.6
CDK5RAP3-217ENST00000580287 TIMP1P01033 207 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CTNNA1P35221 906 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 IKBKEQ14164 716 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TCEAL1Q15170 157 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CLUL1Q15846 466 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DNAJC24Q6P3W2 148 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 XYLT1Q86Y38 959 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CCDC105Q8IYK2 499 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ZDHHC14Q8IZN3 488 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 UHMK1Q8TAS1 419 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SLC35F5Q8WV83 523 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 APBB2Q92870 758 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LRRC45Q96CN5 670 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PCED1BQ96HM7 432 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SYT15Q9BQS2 421 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GPR62Q9BZJ7 368 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 HESX1Q9UBX0 185 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SNX24Q9Y343 169 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CHD7Q9P2D1 2997 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 F8VP50 259 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 INPPL1O15357 1258 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TADA2AO75478 443 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LCP1P13796 627 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SLC11A1P49279 550 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ZNF252P-AS1Q0IIN9 211 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RAB6CQ53S08 254 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DCUN1D2Q6PH85 259 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CCDC137Q6PK04 289 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 JAMLQ86YT9 394 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TTC39CQ8N584 583 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PRELID2Q8N945 189 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FEZF2Q8TBJ5 459 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms