RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 TMEM30AQ9NV96 361 aa18.51■□□□□ 0.55
ITGB4-205ENST00000579211 COMMD8Q9NX08 183 aa18.51■□□□□ 0.55
ITGB4-205ENST00000579211 CHORDC1Q9UHD1 332 aaPredicted RBP18.51■□□□□ 0.55
ITGB4-205ENST00000579211 MRPS17Q9Y2R5 130 aaKnown RBP18.51■□□□□ 0.55
ITGB4-205ENST00000579211 PCDHB4Q9Y5E5 795 aa18.51■□□□□ 0.55
ITGB4-205ENST00000579211 KANSL1LA0AUZ9 987 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 MAN2B1O00754 1011 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 TADA3O75528 432 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 BEST1O76090 585 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 RAD23BP54727 409 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 STARD6P59095 220 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 FCHO2Q0JRZ9 810 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 SGO2Q562F6 1265 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 CT47A1Q5JQC4 288 aaPredicted RBP18.5■□□□□ 0.55
ITGB4-205ENST00000579211 IER5LQ5T953 404 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 CWF19L1Q69YN2 538 aaKnown RBP18.5■□□□□ 0.55
ITGB4-205ENST00000579211 TMEM105Q8N8V8 129 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 OVCA2Q8WZ82 227 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 ZFYVE19Q96K21 471 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 DUSP16Q9BY84 665 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 NACA2Q9H009 215 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 CSNK1G1Q9HCP0 422 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 GCNT4Q9P109 453 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 CCL26Q9Y258 94 aa18.5■□□□□ 0.55
ITGB4-205ENST00000579211 COL4A2P08572 1712 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 ZNF840PA6NDX5 716 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 PES1O00541 588 aaKnown RBP18.49■□□□□ 0.55
ITGB4-205ENST00000579211 NCAM2O15394 837 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 PI15O43692 258 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
ITGB4-205ENST00000579211 PFKLP17858 780 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 CD72P21854 359 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 ZNF268Q14587 947 aaPredicted RBP18.49■□□□□ 0.55
ITGB4-205ENST00000579211 TMEM270Q6UE05 265 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 CLEC20AQ6ZU45 233 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 RRAGAQ7L523 313 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 TTC8Q8TAM2 541 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 NELL2Q99435 816 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 FOXQ1Q9C009 403 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 INTS2Q9H0H0 1204 aaKnown RBP18.49■□□□□ 0.55
ITGB4-205ENST00000579211 TRPV5Q9NQA5 729 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 GKN1Q9NS71 199 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 HESX1Q9UBX0 185 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 PIAS3Q9Y6X2 628 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 MYOFQ9NZM1 2061 aa18.49■□□□□ 0.55
ITGB4-205ENST00000579211 COL4A3Q01955 1670 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 FAM170BA6NMN3 283 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 TNFRSF10BO14763 440 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 MBL2P11226 248 aaPredicted RBP18.48■□□□□ 0.55
ITGB4-205ENST00000579211 ACO1P21399 889 aaKnown RBP18.48■□□□□ 0.55
ITGB4-205ENST00000579211 NUBP1P53384 320 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 HSP90AA4PQ58FG1 418 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 CCDC183Q5T5S1 534 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 GBP6Q6ZN66 633 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 ZMIZ2Q8NF64 920 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 LRRC3BQ96PB8 259 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 SLC22A12Q96S37 553 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 CRACR2AQ9BSW2 395 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 UBE2TQ9NPD8 197 aaPredicted RBP18.48■□□□□ 0.55
ITGB4-205ENST00000579211 TLR8Q9NR97 1041 aaKnown RBP18.48■□□□□ 0.55
ITGB4-205ENST00000579211 KIAA1257Q9ULG3 409 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 ATG2BQ96BY7 2078 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 NCANO14594 1321 aa18.48■□□□□ 0.55
ITGB4-205ENST00000579211 DCNP07585 359 aaKnown RBP18.47■□□□□ 0.55
ITGB4-205ENST00000579211 VDRP11473 427 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 GLULP15104 373 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 MTF1Q14872 753 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 MAN2A1Q16706 1144 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 HECTD3Q5T447 861 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 PJA1Q8NG27 643 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 FAM3CQ92520 227 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 MED15Q96RN5 788 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 C8orf33Q9H7E9 229 aaPredicted RBP18.47■□□□□ 0.55
ITGB4-205ENST00000579211 ANO10Q9NW15 660 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 GTSE1Q9NYZ3 720 aa18.47■□□□□ 0.55
ITGB4-205ENST00000579211 NDRG2Q9UN36 371 aaKnown RBP18.47■□□□□ 0.55
ITGB4-205ENST00000579211 TPM2P07951 284 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 KRT5P13647 590 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 IFNAR2P48551 515 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 GCNT1Q02742 428 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 GOLGA7BQ2TAP0 167 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 ITPRIPL2Q3MIP1 535 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 ARHGAP17Q68EM7 881 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 C1orf228Q6PIY5 440 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 ARHGEF19Q8IW93 802 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 ANKRD52Q8NB46 1076 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 LMO3Q8TAP4 145 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 SH3RF2Q8TEC5 729 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 FAM81BQ96LP2 452 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 IRF2BPLQ9H1B7 796 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 EBF3Q9H4W6 596 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 PNPLA8Q9NP80 782 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 LTB4R2Q9NPC1 389 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 DUS2Q9NX74 493 aaKnown RBP18.46■□□□□ 0.55
ITGB4-205ENST00000579211 GMIPQ9P107 970 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 TSPAN16Q9UKR8 245 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 ARHGAP26Q9UNA1 814 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 ARIH1Q9Y4X5 557 aaPredicted RBP18.46■□□□□ 0.55
ITGB4-205ENST00000579211 F5P12259 2224 aa18.46■□□□□ 0.55
ITGB4-205ENST00000579211 KCNJ18B7U540 433 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms