RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FGF18O76093 207 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 PDGFRBP09619 1106 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 CHRNB2P17787 502 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 PTPN1P18031 435 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 TKTP29401 623 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 DEKP35659 375 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 CYLC1P35663 651 aaPredicted RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 EIF4A3P38919 411 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 PBX3P40426 434 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 ERVK-21P61565 698 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 DSG1Q02413 1049 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 SMARCB1Q12824 385 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 SLC18A3Q16572 532 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 SGO2Q562F6 1265 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 C10orf76Q5T2E6 689 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 C6orf118Q5T5N4 469 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 KIAA0319Q5VV43 1072 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 PPP1R2P3Q6NXS1 205 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 LCLAT1Q6UWP7 414 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 TRIM72Q6ZMU5 477 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 TAS1R1Q7RTX1 841 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 TDHQ8IZJ6 230 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 B3GALNT2Q8NCR0 500 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 OLIG1Q8TAK6 271 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 LNX1Q8TBB1 728 aaPredicted RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 MYCBPAPQ8TBZ2 947 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 PIK3R5Q8WYR1 880 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 TFAP2BQ92481 460 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 EIF3CQ99613 913 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 PKMYT1Q99640 499 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 HNRNPABQ99729 332 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 VN1R3Q9BXE9 311 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 KCNF1Q9H3M0 494 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 ACP6Q9NPH0 428 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 HMGXB4Q9UGU5 601 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 ADAMTS1Q9UHI8 967 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 PUF60Q9UHX1 559 aaKnown RBP8.49□□□□□ -1.05
COPS3-215ENST00000578317 SSX2IPQ9Y2D8 614 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 RALGAPA2Q2PPJ7 1873 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 MICAL3Q7RTP6 2002 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 CDH23Q9H251 3354 aa8.49□□□□□ -1.05
COPS3-215ENST00000578317 ANK1P16157 1881 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 GRXCR1A8MXD5 290 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 O00370 1275 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 DDX3XO00571 662 aaKnown RBP eCLIP8.48□□□□□ -1.051e-11■■■■■ 78.4
COPS3-215ENST00000578317 NDUFA10O95299 355 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 LSM8O95777 96 aaKnown RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 C1RP00736 705 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 CYP1A1P04798 512 aaPredicted RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 PLEKP08567 350 aaPredicted RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 TNFAIP3P21580 790 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 CDH5P33151 784 aaPredicted RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 GPC1P35052 558 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 RABGGTBP53611 331 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 FMO1Q01740 532 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 RAB30Q15771 203 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 NFE2Q16621 373 aaPredicted RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 HIF1AQ16665 826 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 TDRD12Q587J7 1177 aaKnown RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 RTP2Q5QGT7 225 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 FAM109BQ6ICB4 259 aaPredicted RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 SLC8B1Q6J4K2 584 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 RAD9BQ6WBX8 426 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 ACOT1Q86TX2 421 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 TREML1Q86YW5 311 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 C12orf29Q8N999 325 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 ANKRD52Q8NB46 1076 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 KLHL23Q8NBE8 558 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 TRIM44Q96DX7 344 aaPredicted RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 CYFIP2Q96F07 1278 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 TGS1Q96RS0 853 aaKnown RBP8.48□□□□□ -1.05
COPS3-215ENST00000578317 ZSWIM1Q9BR11 485 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 HERC2P3Q9BVR0 1158 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 ZCWPW1Q9H0M4 648 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 RXFP1Q9HBX9 757 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.48□□□□□ -1.05
COPS3-215ENST00000578317 MTRRQ9UBK8 725 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 NAGPAQ9UK23 515 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 NENFQ9UMX5 172 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 IRAK3Q9Y616 596 aa8.48□□□□□ -1.05
COPS3-215ENST00000578317 A0A087X0T9 212 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 A0A1W2PPC1 479 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 MYBPHLA2RUH7 354 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 THAP12O43422 761 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 AKR1B10O60218 316 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 RPLP1P05386 114 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 MMEP08473 750 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 FAM228BP0C875 321 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CTSAP10619 480 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 BMP2P12643 396 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 UNGP13051 313 aaPredicted RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 KIF11P52732 1056 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 KRT83P78385 493 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SMAD3P84022 425 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 TSPY1Q01534 308 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 TAP1Q03518 808 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 GPR17Q13304 367 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ZNF280DQ6N043 979 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 KIAA1841Q6NSI8 718 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ALKBH5Q6P6C2 394 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms