RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ARID5AQ03989 594 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 PDCLQ13371 301 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 CCDC85BQ15834 202 aaPredicted RBP13.4□□□□□ -0.26
MKS1-206ENST00000577824 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 ZNF571Q7Z3V5 609 aaPredicted RBP13.4□□□□□ -0.26
MKS1-206ENST00000577824 TMEM110Q86TL2 294 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 NUP93Q8N1F7 819 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 C1orf131Q8NDD1 294 aaKnown RBP13.4□□□□□ -0.26
MKS1-206ENST00000577824 UBA3Q8TBC4 463 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 OVCA2Q8WZ82 227 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.26
MKS1-206ENST00000577824 HLA-CQ95604 372 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 PANX2Q96RD6 677 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 SLC4A5Q9BY07 1137 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 IL21Q9HBE4 155 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 DNMT3BQ9UBC3 853 aaKnown RBP13.4□□□□□ -0.26
MKS1-206ENST00000577824 UXTQ9UBK9 157 aaPredicted RBP13.4□□□□□ -0.26
MKS1-206ENST00000577824 CD207Q9UJ71 328 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 VCANP13611 3396 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 BRWD1Q9NSI6 2320 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 OBSL1O75147 1896 aa13.4□□□□□ -0.26
MKS1-206ENST00000577824 TADA3O75528 432 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 ACADSBP45954 432 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 GABRB2P47870 512 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 USP46P62068 366 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 SMAD4Q13485 552 aaKnown RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 ASTE1Q2TB18 679 aaPredicted RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 PRSS36Q5K4E3 855 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 RARS2Q5T160 578 aaKnown RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 SNX30Q5VWJ9 437 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 PM20D1Q6GTS8 502 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 TMC5Q6UXY8 1006 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 BHLHA9Q7RTU4 235 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 CCDC186Q7Z3E2 898 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 DNAJB7Q7Z6W7 309 aaPredicted RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 PASD1Q8IV76 773 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 C12orf76Q8N812 135 aaPredicted RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 STKLD1Q8NE28 680 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 GPR152Q8TDT2 470 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 GIPC2Q8TF65 315 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 ZNF512Q96ME7 567 aaPredicted RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 NECTIN4Q96NY8 510 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 CPXM1Q96SM3 734 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 FBXO44Q9H4M3 255 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 ZNF334Q9HCZ1 680 aaPredicted RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 WDR6Q9NNW5 1121 aaKnown RBP13.39□□□□□ -0.27
MKS1-206ENST00000577824 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 ASAH2Q9NR71 780 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 NENFQ9UMX5 172 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 SCML2Q9UQR0 700 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 NOTCH4Q99466 2003 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 CLUHO75153 1309 aa13.39□□□□□ -0.27
MKS1-206ENST00000577824 MYO16Q9Y6X6 1858 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 DDX3XO00571 662 aaKnown RBP eCLIP13.38□□□□□ -0.27
MKS1-206ENST00000577824 GABBR2O75899 941 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 F11P03951 625 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 RHOP08100 348 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 ZDHHC11BP0C7U3 371 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 PTPN2P17706 415 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 KCNA5P22460 613 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 MMP8P22894 467 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
MKS1-206ENST00000577824 MTHFRP42898 656 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 PPP3CCP48454 512 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 MTMR3Q13615 1198 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 CLEC16AQ2KHT3 1053 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 PTPN20Q4JDL3 420 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 PABPC1LQ4VXU2 614 aaKnown RBP13.38□□□□□ -0.27
MKS1-206ENST00000577824 TDRD12Q587J7 1177 aaKnown RBP13.38□□□□□ -0.27
MKS1-206ENST00000577824 CES5AQ6NT32 575 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 TMEM150AQ86TG1 271 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 GPIHBP1Q8IV16 184 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 PDZD8Q8NEN9 1154 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 RIPOR3Q96MK2 946 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 NOX5Q96PH1 765 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 PCDHB18PQ96TA0 734 aa13.38□□□□□ -0.27
MKS1-206ENST00000577824 ZNHIT6Q9NWK9 470 aaKnown RBP13.38□□□□□ -0.27
MKS1-206ENST00000577824 SOBPA7XYQ1 873 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 E5RJQ4 531 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
MKS1-206ENST00000577824 MBTPS2O43462 519 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 MOSPD3O75425 235 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 FBXO21O94952 628 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 PLEKP08567 350 aaPredicted RBP13.37□□□□□ -0.27
MKS1-206ENST00000577824 GZMAP12544 262 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 SKILP12757 684 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 YWHAQP27348 245 aa13.37□□□□□ -0.27
MKS1-206ENST00000577824 CDC25CP30307 473 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms