RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 UBA7P41226 1012 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 WASP42768 502 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 LHX1P48742 406 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 PSMC1P62191 440 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 SLC7A9P82251 487 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 POU5F1Q01860 360 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 RPL6Q02878 288 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 GRIN1Q05586 938 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 KDSRQ06136 332 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 ZNF33AQ06730 810 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 BYSLQ13895 437 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 TRIP6Q15654 476 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 SOWAHAQ2M3V2 549 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 DENND5BQ6ZUT9 1274 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 PDZD3Q86UT5 571 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 NT5DC4Q86YG4 428 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 ADGRF2Q8IZF7 708 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 MINDY1Q8N5J2 469 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 CEP76Q8TAP6 659 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 HNRNPLLQ8WVV9 542 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 RAD54LQ92698 747 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 MYLPFQ96A32 169 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 SAAL1Q96ER3 474 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 FUBP3Q96I24 572 aaKnown RBP eCLIP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 ZSCAN31Q96LW9 406 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 CRTAC1Q9NQ79 661 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 ARHGEF4Q9NR80 690 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 GDAP2Q9NXN4 497 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 HCN2Q9UL51 889 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 CPQQ9Y646 472 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 CEP192Q8TEP8 1941 aa10.82□□□□□ -0.68
NPLOC4-220ENST00000576940 GOLGA8IPA6NC78 632 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 TBC1D3BA6NDS4 549 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 GOLGA8JA6NMD2 632 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 TRIM24O15164 1050 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 AP5Z1O43299 807 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 TBCAO75347 108 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 GABRG2P18507 467 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 GRIA2P42262 883 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 MAGEA11P43364 429 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 TNFRSF4P43489 277 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 RBP5P82980 135 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 CYP27A1Q02318 531 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 RESTQ13127 1097 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 POSTNQ15063 836 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 ZNF423Q2M1K9 1284 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 HSF5Q4G112 596 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 LY6G5CQ5SRR4 150 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 ARL6IP4Q66PJ3 421 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 LMBRD2Q68DH5 695 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 DYMQ7RTS9 669 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 SLC41A1Q8IVJ1 513 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 TOP6BLQ8N6T0 577 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 CACTINQ8WUQ7 758 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 SPATA17Q96L03 361 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 ST6GALNAC4Q9H4F1 302 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 TBC1D7Q9P0N9 293 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 CFAP97Q9P2B7 532 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 SIX4Q9UIU6 781 aa10.81□□□□□ -0.68
NPLOC4-220ENST00000576940 SLC9A3R1O14745 358 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 OLFM2O95897 454 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 NEFLP07196 543 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 MBL2P11226 248 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 ADH5P11766 374 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 PCSK1P29120 753 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 DDIT3P35638 169 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 EIF2DP41214 584 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 DPP6P42658 865 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 PDE6CP51160 858 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 IFRD2Q12894 506 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 TAF10Q12962 218 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 VSTM1Q6UX27 236 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 SFR1Q86XK3 245 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 MIB1Q86YT6 1006 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 BRSK2Q8IWQ3 736 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 PHTF2Q8N3S3 785 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 LRRC52Q8N7C0 313 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 TRIML1Q8N9V2 468 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 MDM1Q8TC05 714 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 NOC3LQ8WTT2 800 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 KBTBD7Q8WVZ9 684 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 AK8Q96MA6 479 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 BBC3Q96PG8 261 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 SYT15Q9BQS2 421 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 STRA6Q9BX79 667 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 PCIF1Q9H4Z3 704 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 PDE11AQ9HCR9 933 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 RBAKQ9NYW8 714 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 CALCOCO1Q9P1Z2 691 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 PCDHB9Q9Y5E1 797 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 PLXNB3Q9ULL4 1909 aa10.8□□□□□ -0.68
NPLOC4-220ENST00000576940 IGHV1OR15-9A0A0B4J2B8 117 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 F8VP50 259 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 PPP1R37O75864 691 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 ADH1CP00326 375 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 OAS1P00973 400 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 FTH1P19P0C7X4 201 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 PFKLP17858 780 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 ANXA13P27216 316 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms