RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 BTNL10A8MVZ5 291 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 PEX1O43933 1283 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 C4orf19Q8IY42 314 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 FAM163AQ96GL9 167 aaPredicted RBP18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 SUN2Q9UH99 717 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 GOLGA8CPA6NN73 597 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 SERPINB9P50453 376 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 TPI1P60174 286 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 MAMLD1Q13495 774 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 LAMB3Q13751 1172 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 GCNAQ96QF7 691 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 TAGLN3Q9UI15 199 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 CXCL8P10145 99 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 GARTP22102 1010 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 MSX2P35548 267 aaPredicted RBP18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 AP3M2P53677 418 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 WASHC2DQ5SRD0 308 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 CYGBQ8WWM9 190 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 LPAR1Q92633 364 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 USP6NLQ92738 828 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 FSCN2O14926 492 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 SPAG6O75602 509 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 PGM3O95394 542 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 POLBP06746 335 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 TMPRSS6Q8IU80 811 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 IPMKQ8NFU5 416 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 TRAPPC12Q8WVT3 735 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 NCLNQ969V3 563 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 MRPL1Q9BYD6 325 aaKnown RBP18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 GCOM2Q9BZD3 368 aaPredicted RBP18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 KLK14Q9P0G3 267 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 NCANO14594 1321 aa18.55■□□□□ 0.56
ATPAF1-214ENST00000576409 C3P01024 1663 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 KCNK1O00180 336 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 OGTO15294 1046 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 SPRP35270 261 aaPredicted RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 TCF7P36402 384 aaPredicted RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 RBP5P82980 135 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 EFHC1Q5JVL4 640 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 N4BP2L1Q5TBK1 243 aaPredicted RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 RFWD2Q8NHY2 731 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 MIPP30301 263 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 GCNT1Q02742 428 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 MCL1Q07820 350 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 MMRN1Q13201 1228 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 CCDC117Q8IWD4 279 aaPredicted RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 DIS3LQ8TF46 1054 aaKnown RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 PTPRN2Q92932 1015 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 CLPTM1LQ96KA5 538 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 ADNPQ9H2P0 1102 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 FAM198AQ9UFP1 575 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 RPTORQ8N122 1335 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 TBC1D12O60347 775 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 PSMG1O95456 288 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 RALBP11234 206 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 CCNHP51946 323 aaPredicted RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 TNFAIP2Q03169 654 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 C15orf59Q2T9L4 293 aaPredicted RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 BOLA3Q53S33 107 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 TRABD2AQ86V40 505 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 ALYREFQ86V81 257 aaKnown RBP18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 SNX13Q9Y5W8 968 aa18.54■□□□□ 0.56
ATPAF1-214ENST00000576409 SMNDC1O75940 238 aaKnown RBP eCLIP18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 VIL1P09327 827 aaKnown RBP18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 TPH1P17752 444 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 RBL1P28749 1068 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 EXOC8Q8IYI6 725 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 OR5B17Q8NGF7 314 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 LRRC4CQ9HCJ2 640 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 SRRM3A6NNA2 597 aaPredicted RBP18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 USP1O94782 785 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 ZBTB7AO95365 584 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 TGM2P21980 687 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 RPL22P35268 128 aaKnown RBP18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 MARSP56192 900 aaKnown RBP18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 PLOD1Q02809 727 aaPredicted RBP18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 RNF220Q5VTB9 566 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 SCUBE3Q8IX30 993 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 KCTD17Q8N5Z5 321 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 MAN1C1Q9NR34 630 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 GRHL1Q9NZI5 618 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 PMPCBO75439 489 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 PTGER2P43116 358 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 BST1Q10588 318 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 PDK4Q16654 411 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 ZNF280CQ8ND82 737 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 CHST12Q9NRB3 414 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 ARL8BQ9NVJ2 186 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 CLIC5Q9NZA1 410 aa18.53■□□□□ 0.56
ATPAF1-214ENST00000576409 CLPTM1O96005 669 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 ZFXP17010 805 aaPredicted RBP18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 GNL1P36915 607 aaPredicted RBP18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 PKNOX1P55347 436 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 CDK16Q00536 496 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 MYBPC2Q14324 1141 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 SLC45A4Q5BKX6 768 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 SLC7A14Q8TBB6 771 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms