RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TMEM105Q8N8V8 129 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 CSGALNACT1Q8TDX6 532 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 DDX23Q9BUQ8 820 aaKnown RBP24.86■■□□□ 1.57
SNF8-217ENST00000576353 DUSP16Q9BY84 665 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 HEBP1Q9NRV9 189 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 RAPGEFL1Q9UHV5 662 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 KIAA1257Q9ULG3 409 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 CCL26Q9Y258 94 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 PTPRDP23468 1912 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 KANSL1LA0AUZ9 987 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 GLULP15104 373 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 GCNT1Q02742 428 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 ARHGAP17Q68EM7 881 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 SASS6Q6UVJ0 657 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 TPRG1Q6ZUI0 275 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 UBR7Q8N806 425 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 SLC22A12Q96S37 553 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 NELL2Q99435 816 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 INTS2Q9H0H0 1204 aaKnown RBP24.85■■□□□ 1.57
SNF8-217ENST00000576353 SIT1Q9Y3P8 196 aa24.85■■□□□ 1.57
SNF8-217ENST00000576353 FAM92AA1XBS5 289 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 ARNTLO00327 626 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 MAN2B1O00754 1011 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 PI15O43692 258 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 MLLT6P55198 1093 aaPredicted RBP24.84■■□□□ 1.57
SNF8-217ENST00000576353 SLC8A3P57103 927 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 CCDC183Q5T5S1 534 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 CC2D1AQ6P1N0 951 aaPredicted RBP24.84■■□□□ 1.57
SNF8-217ENST00000576353 ZNF852Q6ZMS4 543 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 CHORDC1Q9UHD1 332 aaPredicted RBP24.84■■□□□ 1.57
SNF8-217ENST00000576353 MRPS17Q9Y2R5 130 aaKnown RBP24.84■■□□□ 1.57
SNF8-217ENST00000576353 PCDHB4Q9Y5E5 795 aa24.84■■□□□ 1.57
SNF8-217ENST00000576353 SGO2Q562F6 1265 aa24.83■■□□□ 1.57
SNF8-217ENST00000576353 TMEM270Q6UE05 265 aa24.83■■□□□ 1.57
SNF8-217ENST00000576353 RRAGAQ7L523 313 aa24.83■■□□□ 1.57
SNF8-217ENST00000576353 ANKRD52Q8NB46 1076 aa24.83■■□□□ 1.57
SNF8-217ENST00000576353 UBXN6Q9BZV1 441 aa24.83■■□□□ 1.57
SNF8-217ENST00000576353 ARHGAP26Q9UNA1 814 aa24.83■■□□□ 1.57
SNF8-217ENST00000576353 GTPBP10A4D1E9 387 aaKnown RBP24.82■■□□□ 1.56
SNF8-217ENST00000576353 HHLA1C9JL84 531 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 OAS1P00973 400 aaKnown RBP24.82■■□□□ 1.56
SNF8-217ENST00000576353 PAEPP09466 180 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 VDRP11473 427 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 CD19P15391 556 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 ACO1P21399 889 aaKnown RBP24.82■■□□□ 1.56
SNF8-217ENST00000576353 MAN2A1Q16706 1144 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 SNX30Q5VWJ9 437 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 C1orf228Q6PIY5 440 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 GBP6Q6ZN66 633 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 ARHGEF19Q8IW93 802 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 PJA1Q8NG27 643 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 JAKMIP2Q96AA8 810 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 MSANTD3Q96H12 275 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 ZFYVE19Q96K21 471 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 FAM81BQ96LP2 452 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 OSBPL6Q9BZF3 934 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 C8orf33Q9H7E9 229 aaPredicted RBP24.82■■□□□ 1.56
SNF8-217ENST00000576353 GKN1Q9NS71 199 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 ANO10Q9NW15 660 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 HESX1Q9UBX0 185 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 PIAS3Q9Y6X2 628 aa24.82■■□□□ 1.56
SNF8-217ENST00000576353 OLFM2O95897 454 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 ZDHHC11BP0C7U3 371 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 TCF3P15923 654 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 KPNA1P52294 538 aaPredicted RBP24.81■■□□□ 1.56
SNF8-217ENST00000576353 SLC7A9P82251 487 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 UBXN2BQ14CS0 331 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 HECTD3Q5T447 861 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 ENOX1Q8TC92 643 aaKnown RBP24.81■■□□□ 1.56
SNF8-217ENST00000576353 KAT5Q92993 513 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 FAM83CQ9BQN1 747 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 CRACR2AQ9BSW2 395 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 FOXQ1Q9C009 403 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 TLR8Q9NR97 1041 aaKnown RBP24.81■■□□□ 1.56
SNF8-217ENST00000576353 GMIPQ9P107 970 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 SCML2Q9UQR0 700 aa24.81■■□□□ 1.56
SNF8-217ENST00000576353 FAM170BA6NMN3 283 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 PRKCSHP14314 528 aaPredicted RBP24.8■■□□□ 1.56
SNF8-217ENST00000576353 CD72P21854 359 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 TUBP50607 506 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 MTF1Q14872 753 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 PDGFRLQ15198 375 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 ZNF77Q15935 545 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 EXOC3L4Q17RC7 722 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 ENOSF1Q7L5Y1 443 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 GPRIN1Q7Z2K8 1008 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 SH3RF2Q8TEC5 729 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 TUBGCP2Q9BSJ2 902 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 RNF38Q9H0F5 515 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 LTB4R2Q9NPC1 389 aa24.8■■□□□ 1.56
SNF8-217ENST00000576353 UBE2TQ9NPD8 197 aaPredicted RBP24.8■■□□□ 1.56
SNF8-217ENST00000576353 NUP210Q8TEM1 1887 aaPredicted RBP24.8■■□□□ 1.56
SNF8-217ENST00000576353 ZNF318Q5VUA4 2279 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 GREB1Q4ZG55 1949 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 NCAM2O15394 837 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 GALR2O43603 387 aaPredicted RBP24.79■■□□□ 1.56
SNF8-217ENST00000576353 EEF1GP26641 437 aaKnown RBP24.79■■□□□ 1.56
SNF8-217ENST00000576353 KIF11P52732 1056 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 MFAP3P55082 362 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 USP4Q13107 963 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms