RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 PRR23BQ6ZRT6 265 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 ZBTB44Q8NCP5 570 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 RIN3Q8TB24 985 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 SH3RF2Q8TEC5 729 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 ATP2A3Q93084 1043 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 C8orf48Q96LL4 319 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 CEP295NLQ96MC4 621 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 TIGD1Q96MW7 591 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 FAM83CQ9BQN1 747 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 XYLT2Q9H1B5 865 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 GOLPH3LQ9H4A5 285 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 DMAC2Q9NW81 257 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 GMEB2Q9UKD1 530 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 NME7Q9Y5B8 376 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 BECN2A8MW95 431 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 ESPNB1AK53 854 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 VNN1O95497 513 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 HLA-DRAP01903 254 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 C4BPAP04003 597 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 FAM163BP0C2L3 166 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 TRIM49P0CI25 452 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 TRIM49CP0CI26 452 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 RPL13P26373 211 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 ID4P47928 161 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 VAMP7P51809 220 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 CACNA2D1P54289 1103 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 DPYDQ12882 1025 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 NR1H3Q13133 447 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 CCINQ13939 588 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 LPAL2Q16609 132 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 ACOT1Q86TX2 421 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 ZSCAN30Q86W11 494 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 FAM186BQ8IYM0 893 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 FMR1NBQ8N0W7 255 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 SYNPOQ8N3V7 929 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 SUMF1Q8NBK3 374 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 CCDC150Q8NCX0 1101 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 OSCP1Q8WVF1 389 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 FBXO32Q969P5 355 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 SMARCD1Q96GM5 515 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 B3GNT5Q9BYG0 378 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 EPC1Q9H2F5 836 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 ECT2Q9H8V3 914 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 VRTNQ9H8Y1 702 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 DMAP1Q9NPF5 467 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 KRT82Q9NSB4 513 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 TRAF3IP3Q9Y228 551 aa10.26□□□□□ -0.77
NPLOC4-216ENST00000574344 FAM237AA0A1B0GTK4 181 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 OTOL1A6NHN0 477 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 CHURC1-FNTBB4DL54 471 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 LILRB5O75023 590 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 RNF40O75150 1001 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 AP1G2O75843 785 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 RTN3O95197 1032 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 NFATC1O95644 943 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 MBL2P11226 248 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 TDGF1P13385 188 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 YWHAQP27348 245 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 GJA4P35212 333 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 PPP3CCP48454 512 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 FNTBP49356 437 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 ZNF165P49910 485 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 NDST1P52848 882 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 CLDN10P78369 228 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 TAF10Q12962 218 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 ORC1Q13415 861 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 PNOCQ13519 176 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 EML3Q32P44 896 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 ZACNQ401N2 412 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 SPOPLQ6IQ16 392 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 CEP68Q76N32 757 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 NUP93Q8N1F7 819 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 GUF1Q8N442 669 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 PDZD8Q8NEN9 1154 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 ENGASEQ8NFI3 743 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 TAF4BQ92750 862 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 NELL1Q92832 810 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 P2RY13Q9BPV8 354 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 TTLL2Q9BWV7 592 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 SDCBP2Q9H190 292 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 FAM49BQ9NUQ9 324 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 TMEM30AQ9NV96 361 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 SMPD4Q9NXE4 827 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 GCNT4Q9P109 453 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 USP18Q9UMW8 372 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 ARHGAP26Q9UNA1 814 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 SLC8A2Q9UPR5 921 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 CPQQ9Y646 472 aa10.25□□□□□ -0.77
NPLOC4-216ENST00000574344 ZNF840PA6NDX5 716 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms