RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 FBXO43Q4G163 708 aa22.48■■□□□ 1.19
CHRNB1-206ENST00000574054 SLITRK1Q96PX8 696 aa22.48■■□□□ 1.19
CHRNB1-206ENST00000574054 KCTD10Q9H3F6 313 aa22.48■■□□□ 1.19
CHRNB1-206ENST00000574054 DMAC2Q9NW81 257 aa22.48■■□□□ 1.19
CHRNB1-206ENST00000574054 ATP8B3O60423 1300 aa22.48■■□□□ 1.19
CHRNB1-206ENST00000574054 SDK1Q7Z5N4 2213 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 CEP135Q66GS9 1140 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 SLC9A9Q8IVB4 645 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 FAM160A2Q8N612 972 aaPredicted RBP22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 RPLP0P6Q8NHW5 317 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 FBXO32Q969P5 355 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 RNF38Q9H0F5 515 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 VRTNQ9H8Y1 702 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 CPQQ9Y646 472 aa22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.47■■□□□ 1.19
CHRNB1-206ENST00000574054 PDXKO00764 312 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 SCAMP3O14828 347 aaKnown RBP22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 LRP3O75074 770 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 VNN1O95497 513 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 C4BPAP04003 597 aaKnown RBP22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 RPN1P04843 607 aaKnown RBP22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 YWHAQP27348 245 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 DLG4P78352 724 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 CLDN10P78369 228 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 SLC7A9P82251 487 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 ZXDBP98169 803 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 FAM35AQ86V20 835 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 NUP93Q8N1F7 819 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 TNIP3Q96KP6 325 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 HHIPQ96QV1 700 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 SEMA4GQ9NTN9 838 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 HPSEQ9Y251 543 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 FRMD4BQ9Y2L6 1034 aa22.46■■□□□ 1.19
CHRNB1-206ENST00000574054 RPP40O75818 363 aaKnown RBP22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 RTN3O95197 1032 aaPredicted RBP22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 MYL1P05976 194 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 CCDC192P0DO97 292 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 P4HA1P13674 534 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 SYKP43405 635 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 ATXN1P54253 815 aaKnown RBP22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 FILIP1Q7Z7B0 1213 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 ACOT1Q86TX2 421 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 GAB3Q8WWW8 586 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 CCDC47Q96A33 483 aaKnown RBP22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 SDCBP2Q9H190 292 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 CFAP97Q9P2B7 532 aa22.45■■□□□ 1.18
CHRNB1-206ENST00000574054 CALUO43852 315 aaPredicted RBP22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 OAS1P00973 400 aaKnown RBP22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 MBL2P11226 248 aaPredicted RBP22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 HELZP42694 1942 aaKnown RBP22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 NDUFA8P51970 172 aa22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 ORC1Q13415 861 aa22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 PDZD8Q8NEN9 1154 aa22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 TMC2Q8TDI7 906 aa22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 EZH1Q92800 747 aaPredicted RBP22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 ACDQ96AP0 544 aa22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 KCNK16Q96T55 309 aa22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 DMAP1Q9NPF5 467 aaPredicted RBP22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 ZDHHC9Q9Y397 364 aa22.44■■□□□ 1.18
CHRNB1-206ENST00000574054 CCDC163A0A0D9SF12 145 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 AXIN1O15169 862 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 AP1G2O75843 785 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 PRR29P0C7W0 189 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 PIK3CAP42336 1068 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 SEC13P55735 322 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 DMC1Q14565 340 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 CSRP2Q16527 193 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 SGSM1Q2NKQ1 1148 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 ZACNQ401N2 412 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 PRR23CQ6ZRP0 262 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 CACNA2D4Q7Z3S7 1137 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 KBTBD6Q86V97 674 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 SCAMP5Q8TAC9 235 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 SMARCD1Q96GM5 515 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 KRT82Q9NSB4 513 aa22.43■■□□□ 1.18
CHRNB1-206ENST00000574054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 SLC9A3R1O14745 358 aaPredicted RBP22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 KIF20AO95235 890 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 OLFM2O95897 454 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 CYP17A1P05093 508 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 CCDC130P13994 396 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 NDST1P52848 882 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 SLC5A3P53794 718 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 SPOPLQ6IQ16 392 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 PAQR9Q6ZVX9 377 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 SV2AQ7L0J3 742 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 DDX42Q86XP3 938 aaKnown RBP eCLIP22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 CAMKK1Q8N5S9 505 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 CCDC26Q8TAB7 109 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 TMEM174Q8WUU8 243 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 RTKNQ9BST9 563 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 CHORDC1Q9UHD1 332 aaPredicted RBP22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 MAPK8IP1Q9UQF2 711 aa22.42■■□□□ 1.18
CHRNB1-206ENST00000574054 DCDC2BA2VCK2 349 aa22.41■■□□□ 1.18
CHRNB1-206ENST00000574054 APBB3O95704 486 aa22.41■■□□□ 1.18
CHRNB1-206ENST00000574054 HLA-DRAP01903 254 aa22.41■■□□□ 1.18
CHRNB1-206ENST00000574054 OPRD1P41143 372 aa22.41■■□□□ 1.18
CHRNB1-206ENST00000574054 VAMP7P51809 220 aa22.41■■□□□ 1.18
CHRNB1-206ENST00000574054 SYT13Q7L8C5 426 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms