RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ANKRD52Q8NB46 1076 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 VCPIP1Q96JH7 1222 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 KREMEN1Q96MU8 473 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PARD6BQ9BYG5 372 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 DNAJC17Q9NVM6 304 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 IPO11Q9UI26 975 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 RGPD3A6NKT7 1758 aaPredicted RBP10.56□□□□□ -0.72
SMG6-213ENST00000573166 RGPD4Q7Z3J3 1758 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 TRIM66O15016 1216 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 EDIL3O43854 480 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 ATP5DP30049 168 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 PRKCIP41743 596 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 ARHGAP25P42331 645 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 RAD51Q06609 339 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 PLD1Q13393 1074 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 BRD3Q15059 726 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 SLC39A4Q6P5W5 647 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 TRPV1Q8NER1 839 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 ADAM32Q8TC27 787 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 BAP1Q92560 729 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 FSD1LQ9BXM9 530 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 MUC3BQ9H195 1237 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 IGKV6-21A0A0C4DH24 114 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 PFDN6O15212 129 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 LTFP02788 710 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 OR4Q2P0C623 313 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 HPDP32754 393 aaPredicted RBP10.56□□□□□ -0.72
SMG6-213ENST00000573166 SDHAF4Q5VUM1 108 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 CCDC137Q6PK04 289 aaKnown RBP10.56□□□□□ -0.72
SMG6-213ENST00000573166 MICALCLQ6ZW33 695 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 ARFGAP2Q8N6H7 521 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 MS4A14Q96JA4 679 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 CATSPERBQ9H7T0 1116 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 TBC1D13Q9NVG8 400 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 GPATCH2LQ9NWQ4 482 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 NKIRAS1Q9NYS0 192 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 CACNG4Q9UBN1 327 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 LRRC37AA6NMS7 1700 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 PAPPA2Q9BXP8 1791 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 NEMP1O14524 444 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 ZNF185O15231 689 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 NFKBIAP25963 317 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 SLFN11Q7Z7L1 901 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 DEFB106AQ8N104 65 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 ATAD1Q8NBU5 361 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 HSFY1Q96LI6 401 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 ATP8A1Q9Y2Q0 1164 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 CAPN6Q9Y6Q1 641 aa10.56□□□□□ -0.72
SMG6-213ENST00000573166 PROSCO94903 275 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 SPATA31D3P0C874 917 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 SAT1P21673 171 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 CHRNA3P32297 505 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 DUSP4Q13115 394 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 MEA1Q16626 185 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 PPP1R26Q5T8A7 1209 aaPredicted RBP10.55□□□□□ -0.72
SMG6-213ENST00000573166 SPATA31D4Q6ZUB0 917 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 CROCCP2Q86T23 111 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 ZDHHC17Q8IUH5 632 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 NDUFAF2Q8N183 169 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 CDKL2Q92772 493 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 UXTQ9UBK9 157 aaPredicted RBP10.55□□□□□ -0.72
SMG6-213ENST00000573166 GJB6O95452 261 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 ST8SIA6P61647 398 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 SLC6A3Q01959 620 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 CREMQ03060 361 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 ADCY1Q08828 1119 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 CDH18Q13634 790 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 DDR2Q16832 855 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 WDR59Q6PJI9 974 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 ATPAF2Q8N5M1 289 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 L1RE1Q9UN81 338 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 F5H5T6 163 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 GPS1Q13098 491 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 PABPC1LQ4VXU2 614 aaKnown RBP10.55□□□□□ -0.72
SMG6-213ENST00000573166 FAM35AQ86V20 835 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 SPATA18Q8TC71 538 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 IFT43Q96FT9 208 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 FAM118BQ9BPY3 351 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 USP18Q9UMW8 372 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 INSL6Q9Y581 213 aa10.55□□□□□ -0.72
SMG6-213ENST00000573166 IQCF3P0C7M6 154 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 RBP3P10745 1247 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 CCR1P32246 355 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 HOXD13P35453 343 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 POU5F1Q01860 360 aaKnown RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 ITPRIPL1Q6GPH6 555 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 REXO1L1PQ8IX06 675 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 SPATA4Q8NEY3 305 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 SPPL2BQ8TCT7 592 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 USP33Q8TEY7 942 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 FGD4Q96M96 766 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 FBXL18Q96ME1 805 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 FMO2Q99518 471 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 CORO1BQ9BR76 489 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ADAMTS10Q9H324 1103 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 TLE6Q9H808 572 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 TAS2R14Q9NYV8 317 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 GRID2IPA4D2P6 1211 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 H0Y626 953 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms