RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 KINO60870 393 aaKnown RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 HIP1RO75146 1068 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 SOAT2O75908 522 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 PGRP06401 933 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 EPHX1P07099 455 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 OR4Q2P0C623 313 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 ELF1P32519 619 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 YARSP54577 528 aaKnown RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 ROR1Q01973 937 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 DHX8Q14562 1220 aaKnown RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 ZNF460Q14592 562 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 NT5DC1Q5TFE4 455 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 ZNF468Q5VIY5 522 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 CDCA2Q69YH5 1023 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 MCTP1Q6DN14 999 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 ZC3H14Q6PJT7 736 aaKnown RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 FAM43BQ6ZT52 329 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 MTSS1LQ765P7 747 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 C12orf40Q86WS4 652 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 ZNF227Q86WZ6 799 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 ZNF513Q8N8E2 541 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 RSPH1Q8WYR4 309 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 BICD1Q96G01 975 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 TCHPQ9BT92 498 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 C2orf40Q9H1Z8 148 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 CDT1Q9H211 546 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 TRIM39Q9HCM9 518 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 FNIP2Q9P278 1114 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 DNMT3BQ9UBC3 853 aaKnown RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 STK39Q9UEW8 545 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
PRPF8-204ENST00000572445 SMG5Q9UPR3 1016 aaKnown RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 TIMM13Q9Y5L4 95 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-204ENST00000572445 NCANO14594 1321 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 MAP1BP46821 2468 aaKnown RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 NPHP3-ACAD11A0A0J9YXS1 232 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 KANSL1LA0AUZ9 987 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 WDR27A2RRH5 827 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SLC38A8A6NNN8 435 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 ANHXE9PGG2 379 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 CBFA2T2O43439 604 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 CREB3O43889 395 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SIN3BO75182 1162 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 LYPLA2O95372 231 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SEC24AO95486 1093 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 CAPNS1P04632 268 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 TP53P04637 393 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 ITGAVP06756 1048 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 MAOBP27338 520 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 HOXC13P31276 330 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 VIPR2P41587 438 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 NAMPTP43490 491 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 TWF1Q12792 350 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SRSF5Q13243 272 aaKnown RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 DMP1Q13316 513 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 ANKRD1Q15327 319 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 PCSK7Q16549 785 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 DCAF4L1Q3SXM0 396 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 CTXN3Q4LDR2 81 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SLC44A4Q53GD3 710 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 HAUS3Q68CZ6 603 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 TANGO2Q6ICL3 276 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 LILRA6Q6PI73 481 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 PDZD4Q76G19 769 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 FGD2Q7Z6J4 655 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 FAM184AQ8NB25 1140 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 STKLD1Q8NE28 680 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 ATRIPQ8WXE1 791 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 ELMO3Q96BJ8 720 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 ZBTB45Q96K62 511 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SLC6A18Q96N87 628 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 PPP1R10Q96QC0 940 aaKnown RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 MTMR9Q96QG7 549 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 NACC1Q96RE7 527 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 CCDC94Q9BW85 323 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 ZHX3Q9H4I2 956 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 BRD9Q9H8M2 597 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 TUFT1Q9NNX1 390 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 LTB4R2Q9NPC1 389 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 OSGEPQ9NPF4 335 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 KMT5AQ9NQR1 393 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 RBM12Q9NTZ6 932 aaKnown RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 INTS7Q9NVH2 962 aaKnown RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 MTRRQ9UBK8 725 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 SFMBT1Q9UHJ3 866 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 KLF15Q9UIH9 416 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 OBSL1O75147 1896 aa6.83□□□□□ -1.32
PRPF8-204ENST00000572445 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-204ENST00000572445 PHLPP2Q6ZVD8 1323 aa6.82□□□□□ -1.32
PRPF8-204ENST00000572445 SMIM28A0A1B0GU29 152 aa6.82□□□□□ -1.32
PRPF8-204ENST00000572445 K7ERI5 159 aa6.82□□□□□ -1.32
PRPF8-204ENST00000572445 AGRPO00253 132 aa6.82□□□□□ -1.32
PRPF8-204ENST00000572445 ACKR2O00590 384 aa6.82□□□□□ -1.32
PRPF8-204ENST00000572445 PRODHO43272 600 aa6.82□□□□□ -1.32
PRPF8-204ENST00000572445 EFEMP2O95967 443 aa6.82□□□□□ -1.32
PRPF8-204ENST00000572445 HNRNPA1P09651 372 aaKnown RBP eCLIP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms