RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PNPLA8Q9NP80 782 aa9.96□□□□□ -0.82
NPLOC4-208ENST00000572351 TMEM30AQ9NV96 361 aa9.96□□□□□ -0.82
NPLOC4-208ENST00000572351 CLEC1BQ9P126 229 aa9.96□□□□□ -0.82
NPLOC4-208ENST00000572351 UXTQ9UBK9 157 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-208ENST00000572351 COL4A4P53420 1690 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-208ENST00000572351 TRIOBPQ9H2D6 2365 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 H3BQ06 376 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ABL1P00519 1130 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 POU2F2P09086 479 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 YWHAQP27348 245 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 EIF4A3P38919 411 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ACADSBP45954 432 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 TKTL1P51854 596 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ITIH3Q06033 890 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 MTMR3Q13615 1198 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ARID5BQ14865 1188 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 CLEC16AQ2KHT3 1053 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 PABPC1LQ4VXU2 614 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 PKDCCQ504Y2 493 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ATAT1Q5SQI0 421 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 HGSNATQ68CP4 663 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 PMF1Q6P1K2 205 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 SYCE2Q6PIF2 218 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 CYP26C1Q6V0L0 522 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 PDZD4Q76G19 769 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 GPRIN1Q7Z2K8 1008 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 GRASPQ7Z6J2 395 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 GPR149Q86SP6 731 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ERICH1Q86X53 443 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 LEMD2Q8NC56 503 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 SCAMP5Q8TAC9 235 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 STK32AQ8WU08 396 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 KCTD13Q8WZ19 329 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 GOLGA1Q92805 767 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 FBXO32Q969P5 355 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 RIPOR3Q96MK2 946 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 SLITRK1Q96PX8 696 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 PCDHB18PQ96TA0 734 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 BAG1Q99933 345 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 MIS12Q9H081 205 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ADAM7Q9H2U9 754 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 UBE2ZQ9H832 354 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 NHEJ1Q9H9Q4 299 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 COMMD8Q9NX08 183 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ARHGAP20Q9P2F6 1191 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 ADAMTS1Q9UHI8 967 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 CD207Q9UJ71 328 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 SCN1AP35498 2009 aa9.95□□□□□ -0.82
NPLOC4-208ENST00000572351 PLXNA4Q9HCM2 1894 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 SSU72P8A0A1W2PR75 194 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 HHLA1C9JL84 531 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 E5RJQ4 531 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 DDX3XO00571 662 aaKnown RBP eCLIP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 SART1O43290 800 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 IPO7O95373 1038 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 FGF19O95750 216 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 ZBED1O96006 694 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CYP1A1P04798 512 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 RHOP08100 348 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 USP17L7P0C7H9 530 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 UNGP13051 313 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 GABRR2P28476 465 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CDC25CP30307 473 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CDH5P33151 784 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 LTBRP36941 435 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 KIF11P52732 1056 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 USP46P62068 366 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 NOMO3P69849 1222 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CDK17Q00537 523 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 GFPT1Q06210 699 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CCDC173Q0VFZ6 552 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 TAF10Q12962 218 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 COL19A1Q14993 1142 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 SPA17Q15506 151 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 OR6B2Q6IFH4 312 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 WDR59Q6PJI9 974 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 MMS22LQ6ZRQ5 1243 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 TMTC1Q8IUR5 882 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 HS6ST3Q8IZP7 471 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 WDTC1Q8N5D0 677 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 PDZD8Q8NEN9 1154 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 SLC30A5Q8TAD4 765 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 ZNF707Q96C28 371 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CHP1Q99653 195 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 C11orf70Q9BRQ4 267 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 ULBP1Q9BZM6 244 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 ATXN3LQ9H3M9 355 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CYLDQ9NQC7 956 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 CNGB3Q9NQW8 809 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 HCFC1R1Q9NWW0 138 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 TRPM5Q9NZQ8 1165 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 ADAM22Q9P0K1 906 aa9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 DNMT3BQ9UBC3 853 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 MRPS23Q9Y3D9 190 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-208ENST00000572351 NLRC5Q86WI3 1866 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TSC2P49815 1807 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 A0A087X0T9 212 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 A0A1W2PRU2 124 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 ZNF197O14709 1029 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms