RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 RHDQ02161 417 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 TOB2Q14106 344 aaPredicted RBP14.02□□□□□ -0.17
CCDC40-208ENST00000572270 SAFBQ15424 915 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCDC40-208ENST00000572270 BTBD8Q5XKL5 378 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 WSCD1Q658N2 575 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 ZPBP2Q6X784 338 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 KRI1Q8N9T8 703 aaKnown RBP14.02□□□□□ -0.17
CCDC40-208ENST00000572270 IPO4Q8TEX9 1081 aaKnown RBP14.02□□□□□ -0.17
CCDC40-208ENST00000572270 LEO1Q8WVC0 666 aaPredicted RBP14.02□□□□□ -0.17
CCDC40-208ENST00000572270 DNASE2BQ8WZ79 361 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 WBP1Q96G27 269 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 TMEM60Q9H2L4 133 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 C17orf75Q9HAS0 396 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 TMLHEQ9NVH6 421 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 BTBD3Q9Y2F9 522 aa14.02□□□□□ -0.17
CCDC40-208ENST00000572270 MGAQ8IWI9 3026 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 UNC79Q9P2D8 2635 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 PIRO00625 290 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 NCAM1P13591 858 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 CYP2F1P24903 491 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 CD6P30203 668 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 CCT6AP40227 531 aaKnown RBP14.01□□□□□ -0.17
CCDC40-208ENST00000572270 TAF6P49848 677 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 PTPRNQ16849 979 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 INAVAQ3KP66 663 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 C10orf76Q5T2E6 689 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 JADE1Q6IE81 842 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 KIAA1324Q6UXG2 1013 aaKnown RBP14.01□□□□□ -0.17
CCDC40-208ENST00000572270 WASF1Q92558 559 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 TNFRSF25Q93038 417 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 ERLEC1Q96DZ1 483 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 ABCB6Q9NP58 842 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 SCN1AP35498 2009 aa14.01□□□□□ -0.17
CCDC40-208ENST00000572270 COL5A1P20908 1838 aaPredicted RBP14.01□□□□□ -0.17
CCDC40-208ENST00000572270 PIEZO2Q9H5I5 2752 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 MYOFQ9NZM1 2061 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 A0A1W2PQF6 199 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 WNT7AO00755 349 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 C6P13671 934 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 MCM7P33993 719 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 SMTNP53814 917 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 ZXDBP98169 803 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 TLE3Q04726 772 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 GAD2Q05329 585 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 CCDC173Q0VFZ6 552 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 MYO1EQ12965 1108 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 TMEM132DQ14C87 1099 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 ENOX2Q16206 610 aaKnown RBP14□□□□□ -0.17
CCDC40-208ENST00000572270 RHBDF2Q6PJF5 856 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 RUFY3Q7L099 469 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 FMNL3Q8IVF7 1028 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 CD302Q8IX05 232 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 CHPFQ8IZ52 775 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 DAW1Q8N136 415 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 PHTF2Q8N3S3 785 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 LARP6Q9BRS8 491 aaKnown RBP14□□□□□ -0.17
CCDC40-208ENST00000572270 CD93Q9NPY3 652 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 DEC1Q9P2X7 70 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 FTSJ1Q9UET6 329 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 KCNG1Q9UIX4 513 aa14□□□□□ -0.17
CCDC40-208ENST00000572270 ANO9A1A5B4 782 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 SCAMP3O14828 347 aaKnown RBP13.99□□□□□ -0.17
CCDC40-208ENST00000572270 CSRP3P50461 194 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
CCDC40-208ENST00000572270 SV2CQ496J9 727 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 DCAF12L1Q5VU92 463 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 DDX42Q86XP3 938 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC40-208ENST00000572270 SCN4BQ8IWT1 228 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 NAT16Q8N8M0 369 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 TERB1Q8NA31 727 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 CADM4Q8NFZ8 388 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 FGF11Q92914 225 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 TOE1Q96GM8 510 aaKnown RBP13.99□□□□□ -0.17
CCDC40-208ENST00000572270 GPR174Q9BXC1 333 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 NRSN2Q9GZP1 204 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 HAPLN2Q9GZV7 340 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 DDX19AQ9NUU7 478 aaKnown RBP13.99□□□□□ -0.17
CCDC40-208ENST00000572270 SMPD4Q9NXE4 827 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 TRPM5Q9NZQ8 1165 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 TBC1D14Q9P2M4 693 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 KIAA1024Q9UPX6 916 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 PCDHB6Q9Y5E3 794 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 CPQQ9Y646 472 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 MYH11P35749 1972 aa13.99□□□□□ -0.17
CCDC40-208ENST00000572270 OGTO15294 1046 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 ACTN2P35609 894 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 LIG4P49917 911 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 CCT8P50990 548 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 SLC7A9P82251 487 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 BNC1Q01954 994 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 PDIA5Q14554 519 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 ECM1Q16610 540 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 LY6G5CQ5SRR4 150 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 BROXQ5VW32 411 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 SPATA2LQ8IUW3 424 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-208ENST00000572270 SPACA3Q8IXA5 215 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 TMEM161BQ8NDZ6 487 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 TMEM176AQ96HP8 235 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 MRGPRX1Q96LB2 322 aa13.98□□□□□ -0.17
CCDC40-208ENST00000572270 LGMNQ99538 433 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms