RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 JAKMIP2Q96AA8 810 aa15.43■□□□□ 0.06
LITAF-208ENST00000571627 NT5C1AQ9BXI3 368 aa15.43■□□□□ 0.06
LITAF-208ENST00000571627 KIF9Q9HAQ2 790 aa15.43■□□□□ 0.06
LITAF-208ENST00000571627 GKN1Q9NS71 199 aa15.43■□□□□ 0.06
LITAF-208ENST00000571627 THG1LQ9NWX6 298 aaKnown RBP15.43■□□□□ 0.06
LITAF-208ENST00000571627 RWDD2AQ9UIY3 292 aa15.43■□□□□ 0.06
LITAF-208ENST00000571627 MRPS17Q9Y2R5 130 aaKnown RBP15.43■□□□□ 0.06
LITAF-208ENST00000571627 ZFHX2Q9C0A1 2572 aaPredicted RBP15.42■□□□□ 0.06
LITAF-208ENST00000571627 MYO15AQ9UKN7 3530 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 ZNF840PA6NDX5 716 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 SOBPA7XYQ1 873 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 SPECC1L-ADORA2AF8WAN1 911 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 MAN2B1O00754 1011 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 TNFRSF10BO14763 440 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 ARSAP15289 507 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 HDCP19113 662 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 YWHAQP27348 245 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 SLC5A3P53794 718 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 MAP3K7CLP57077 242 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 PLCB2Q00722 1185 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 FZD5Q13467 585 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 ZNF268Q14587 947 aaPredicted RBP15.42■□□□□ 0.06
LITAF-208ENST00000571627 ZNF77Q15935 545 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 TXNDC11Q6PKC3 985 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 ALYREFQ86V81 257 aaKnown RBP15.42■□□□□ 0.06
LITAF-208ENST00000571627 ZNF687Q8N1G0 1237 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 GPT2Q8TD30 523 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 FBXO32Q969P5 355 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 SLITRK1Q96PX8 696 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 FAM83CQ9BQN1 747 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 OSBPL6Q9BZF3 934 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 EBF3Q9H4W6 596 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 HPS4Q9NQG7 708 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 CISHQ9NSE2 258 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 EHD2Q9NZN4 543 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 DACH1Q9UI36 760 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 COQ4Q9Y3A0 265 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 WDR87Q6ZQQ6 2873 aa15.42■□□□□ 0.06
LITAF-208ENST00000571627 OTOL1A6NHN0 477 aaPredicted RBP15.41■□□□□ 0.06
LITAF-208ENST00000571627 RTN3O95197 1032 aaPredicted RBP15.41■□□□□ 0.06
LITAF-208ENST00000571627 FAM200BP0CF97 657 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 CTHP32929 405 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 FMO5P49326 533 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 MRE11P49959 708 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 ZXDBP98169 803 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 LRMPQ12912 555 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 USP4Q13107 963 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 MTF1Q14872 753 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 ITPRIPL2Q3MIP1 535 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 GPRIN1Q7Z2K8 1008 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 SH3RF2Q8TEC5 729 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 CLDN23Q96B33 292 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 CYFIP2Q96F07 1278 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 NELL2Q99435 816 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 HNRNPABQ99729 332 aaKnown RBP15.41■□□□□ 0.06
LITAF-208ENST00000571627 RNF38Q9H0F5 515 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 IRF2BPLQ9H1B7 796 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 SPATA6Q9NWH7 488 aaPredicted RBP15.41■□□□□ 0.06
LITAF-208ENST00000571627 SMPD4Q9NXE4 827 aa15.41■□□□□ 0.06
LITAF-208ENST00000571627 USP34Q70CQ2 3546 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 FANCMQ8IYD8 2048 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 SCAMP3O14828 347 aaKnown RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 TRIM21P19474 475 aaKnown RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 PGFP49763 221 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 CT47A1Q5JQC4 288 aaPredicted RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 PPP1R26Q5T8A7 1209 aaPredicted RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 CC2D1AQ6P1N0 951 aaPredicted RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 CLEC20AQ6ZU45 233 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 RALGPS2Q86X27 583 aaPredicted RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 C1orf210Q8IVY1 113 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 SLC4A11Q8NBS3 891 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 FAXDC2Q96IV6 333 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 SRRTQ9BXP5 876 aaKnown RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 C8orf33Q9H7E9 229 aaPredicted RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 CSNK1G1Q9HCP0 422 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 GMIPQ9P107 970 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 CHORDC1Q9UHD1 332 aaPredicted RBP15.4■□□□□ 0.06
LITAF-208ENST00000571627 ARHGAP26Q9UNA1 814 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 WNT6Q9Y6F9 365 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 ATG2BQ96BY7 2078 aa15.4■□□□□ 0.06
LITAF-208ENST00000571627 HHLA1C9JL84 531 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 NCAM2O15394 837 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 OAS1P00973 400 aaKnown RBP15.39■□□□□ 0.05
LITAF-208ENST00000571627 CCDC192P0DO97 292 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 PPP3CCP48454 512 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 PDE6CP51160 858 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 RAD23BP54727 409 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 MLLT6P55198 1093 aaPredicted RBP15.39■□□□□ 0.05
LITAF-208ENST00000571627 MARSP56192 900 aaKnown RBP15.39■□□□□ 0.05
LITAF-208ENST00000571627 CUL2Q13617 745 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 RUNX3Q13761 415 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 PON2Q15165 354 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 MAML2Q8IZL2 1156 aaPredicted RBP15.39■□□□□ 0.05
LITAF-208ENST00000571627 CHFRQ96EP1 664 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 HEXIM2Q96MH2 286 aaKnown RBP15.39■□□□□ 0.05
LITAF-208ENST00000571627 MED15Q96RN5 788 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 DNAI2Q9GZS0 605 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 LMAN1LQ9HAT1 526 aa15.39■□□□□ 0.05
LITAF-208ENST00000571627 RBM12Q9NTZ6 932 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms