RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 OATP04181 439 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 ARL2P36404 184 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 PGM1P36871 562 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 DARS2Q6PI48 645 aaKnown RBP18.23■□□□□ 0.51
SCARF1-205ENST00000571272 BRSK2Q8IWQ3 736 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 PPM1NQ8N819 430 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 PIDD1Q9HB75 910 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 WASF2Q9Y6W5 498 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 TRIM49D1C9J1S8 452 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 PLSCR1O15162 318 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 APBA3O96018 575 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 AMPD1P23109 780 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 SP100P23497 879 aaPredicted RBP18.23■□□□□ 0.51
SCARF1-205ENST00000571272 OSTNP61366 133 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 CAPSQ13938 189 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 RNF220Q5VTB9 566 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 SH2D5Q6ZV89 423 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 CHSY1Q86X52 802 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 TMEM130Q8N3G9 435 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 SRPK1Q96SB4 655 aaKnown RBP18.23■□□□□ 0.51
SCARF1-205ENST00000571272 KCNG1Q9UIX4 513 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 POLIQ9UNA4 740 aa18.23■□□□□ 0.51
SCARF1-205ENST00000571272 CCDC195A0A1B0GUA6 201 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 B2RBV5 119 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 H3BRJ5 948 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 COPEO14579 308 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 ENO1P06733 434 aaKnown RBP18.22■□□□□ 0.51
SCARF1-205ENST00000571272 KITP10721 976 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 MIPP30301 263 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 THNSL1Q8IYQ7 743 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 FAM161BQ96MY7 647 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 CPXM1Q96SM3 734 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 TSC22D3Q99576 134 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 MARCOQ9UEW3 520 aaPredicted RBP18.22■□□□□ 0.51
SCARF1-205ENST00000571272 STRIP2Q9ULQ0 834 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 EFR3BQ9Y2G0 817 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 TGDSO95455 350 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 RARBP10826 455 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 SLC18A2Q05940 514 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 ZNF699Q32M78 642 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 FAXCQ5TGI0 409 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 WDR49Q8IV35 697 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 TEKT4Q8WW24 435 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 SLC13A1Q9BZW2 595 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 PHACTR1Q9C0D0 580 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 LRCH1Q9Y2L9 728 aa18.22■□□□□ 0.51
SCARF1-205ENST00000571272 APOC4-APOC2K7ER74 178 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 MAP3K6O95382 1288 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 APOC2P02655 101 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 POLR2BP30876 1174 aaKnown RBP18.21■□□□□ 0.51
SCARF1-205ENST00000571272 CDH5P33151 784 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-205ENST00000571272 CDH8P55286 799 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 DUOXA2Q1HG44 320 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 SGSM1Q2NKQ1 1148 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 TREML1Q86YW5 311 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 LRRN4Q8WUT4 740 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 ARHGEF4Q9NR80 690 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 CNTN3Q9P232 1028 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 PCDHGC3Q9UN70 934 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 TEX264Q9Y6I9 313 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 SKIP12755 728 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 FSTL1Q12841 308 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 LBRQ14739 615 aaKnown RBP18.21■□□□□ 0.51
SCARF1-205ENST00000571272 KRT72Q14CN4 511 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 IRGCQ6NXR0 463 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 CDR2LQ86X02 465 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-205ENST00000571272 ARID3BQ8IVW6 561 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-205ENST00000571272 FAF2Q96CS3 445 aa18.21■□□□□ 0.51
SCARF1-205ENST00000571272 ZNF668Q96K58 619 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-205ENST00000571272 PPARGC1AQ9UBK2 798 aaKnown RBP18.21■□□□□ 0.51
SCARF1-205ENST00000571272 CXorf49A8MYA2 514 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-205ENST00000571272 SPATA31C2B4DYI2 1134 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 CYB561D2O14569 222 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ATG7O95352 703 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 KDSRQ06136 332 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 RAB6CQ53S08 254 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 SH3PXD2AQ5TCZ1 1133 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 CDHR1Q96JP9 859 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 CLPTM1LQ96KA5 538 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 RAB6CQ9H0N0 254 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 UTRNP46939 3433 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 PIK3R2O00459 728 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ADCY3O60266 1144 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ERBB2P04626 1255 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 KRT19P08727 400 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 SRGAP2CP0DJJ0 459 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 GNAT1P11488 350 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ASPAP45381 313 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 YWHAEP62258 255 aaKnown RBP18.2■□□□□ 0.5
SCARF1-205ENST00000571272 TMPRSS15P98073 1019 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 OCRLQ01968 901 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ROR1Q01973 937 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 BMPR2Q13873 1038 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 HSF5Q4G112 596 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-205ENST00000571272 C1orf228Q6PIY5 440 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 PHC3Q8NDX5 983 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 RAB6BQ9NRW1 208 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 STX18Q9P2W9 335 aaKnown RBP18.2■□□□□ 0.5
SCARF1-205ENST00000571272 USP18Q9UMW8 372 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms