RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 LCP1P13796 627 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 CYP2F1P24903 491 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 PSEN1P49768 467 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 RGS7P49802 495 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 TKTL1P51854 596 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 MRPS5P82675 430 aaKnown RBP12.54□□□□□ -0.4
CDRT1-206ENST00000571263 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 GPM6BQ13491 265 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
CDRT1-206ENST00000571263 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 ZNF569Q5MCW4 686 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 PPP1R15BQ5SWA1 713 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 FAM102AQ5T9C2 384 aaPredicted RBP12.54□□□□□ -0.4
CDRT1-206ENST00000571263 C11orf63Q6NUN7 778 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 RSPO2Q6UXX9 243 aaPredicted RBP12.54□□□□□ -0.4
CDRT1-206ENST00000571263 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 CCDC149Q6ZUS6 474 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 SLC26A9Q7LBE3 791 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 SCN4BQ8IWT1 228 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 SCUBE3Q8IX30 993 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 TCEAL8Q8IYN2 117 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 ZMIZ2Q8NF64 920 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
CDRT1-206ENST00000571263 MICAL1Q8TDZ2 1067 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 HDAC7Q8WUI4 952 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 ARHGEF26Q96DR7 871 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 C17orf80Q9BSJ5 609 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 PAXBP1Q9Y5B6 917 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 DUSP10Q9Y6W6 482 aa12.54□□□□□ -0.4
CDRT1-206ENST00000571263 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.53□□□□□ -0.4
CDRT1-206ENST00000571263 HHLA1C9JL84 531 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 F8VP50 259 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 TULP2O00295 520 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 TEX28O15482 410 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 PAPSS1O43252 624 aaPredicted RBP12.53□□□□□ -0.4
CDRT1-206ENST00000571263 BUB1O43683 1085 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 HSF2BPO75031 334 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 BEST1O76090 585 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 MOCS3O95396 460 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 ZBED1O96006 694 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 TNNT1P13805 278 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 DNAJB2P25686 324 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 KLRC2P26717 231 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 CASQ1P31415 396 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 MAN1A1P33908 653 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 CA8P35219 290 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 YWHAZP63104 245 aaKnown RBP12.53□□□□□ -0.4
CDRT1-206ENST00000571263 DUSP4Q13115 394 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 TUBB2AQ13885 445 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 PM20D1Q6GTS8 502 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 OLFML1Q6UWY5 402 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 SLFN11Q7Z7L1 901 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
CDRT1-206ENST00000571263 ATAD1Q8NBU5 361 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 KIF18AQ8NI77 898 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 PGLYRP2Q96PD5 576 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 KLHL5Q96PQ7 755 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 TUBB2BQ9BVA1 445 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
CDRT1-206ENST00000571263 OSGEPQ9NPF4 335 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 ANAPC7Q9UJX3 599 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 AMFRQ9UKV5 643 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 TFR2Q9UP52 801 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 ASB3Q9Y575 518 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 KIAA1671Q9BY89 1806 aa12.53□□□□□ -0.4
CDRT1-206ENST00000571263 VWA8A3KMH1 1905 aa12.52□□□□□ -0.4
CDRT1-206ENST00000571263 CTAGE9A4FU28 777 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 MIF4GDA9UHW6 222 aaKnown RBP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 GOLGA8SH3BPF8 625 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PRRG1O14668 218 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 TNFRSF10BO14763 440 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 FSCN2O14926 492 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PALMO75781 387 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 RNF8O76064 485 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 CNPP09543 421 aaKnown RBP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 CSH1P0DML2 217 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 CSH2P0DML3 217 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 MYOGP15173 224 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PRLRP16471 622 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 GPD1P21695 349 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PPP3CCP48454 512 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 DAOAP59103 153 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 ERVFC1P60507 584 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 MLLT1Q03111 559 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 VEPH1Q14D04 833 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PTPROQ16827 1216 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 DNTTIP2Q5QJE6 756 aaKnown RBP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 CYP4A22Q5TCH4 519 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 FAM183BPQ6ZVS7 135 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PEX26Q7Z412 305 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 DAAM2Q86T65 1068 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms