RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
TVP23B-204ENST00000571018 GCNT4Q9P109 453 aa13.43□□□□□ -0.26
TVP23B-204ENST00000571018 SIT1Q9Y3P8 196 aa13.43□□□□□ -0.26
TVP23B-204ENST00000571018 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
TVP23B-204ENST00000571018 TRAV19A0A0A6YYK7 116 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 FAM92AA1XBS5 289 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 C2orf78A6NCI8 922 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 SHISA7A6NL88 538 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 AFPP02771 609 aaKnown RBP13.42□□□□□ -0.26
TVP23B-204ENST00000571018 HDCP19113 662 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 TBXAS1P24557 533 aaPredicted RBP13.42□□□□□ -0.26
TVP23B-204ENST00000571018 YWHAQP27348 245 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 ADORA2BP29275 332 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 PDE6CP51160 858 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 RAD23BP54727 409 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 MLLT6P55198 1093 aaPredicted RBP13.42□□□□□ -0.26
TVP23B-204ENST00000571018 MAP3K7CLP57077 242 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 CETN1Q12798 172 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 LRMPQ12912 555 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 DPCR1Q3MIW9 517 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 CLEC20AQ6ZU45 233 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 TPRG1Q6ZUI0 275 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 ARL14EPQ8N8R7 260 aaPredicted RBP13.42□□□□□ -0.26
TVP23B-204ENST00000571018 SLC4A11Q8NBS3 891 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 PDZD8Q8NEN9 1154 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 PRSS33Q8NF86 280 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 PJA1Q8NG27 643 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 OVCA2Q8WZ82 227 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 TMEM176AQ96HP8 235 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 HEXIM2Q96MH2 286 aaKnown RBP13.42□□□□□ -0.26
TVP23B-204ENST00000571018 CYP2S1Q96SQ9 504 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 NELL2Q99435 816 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 OSBPL6Q9BZF3 934 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 TRPC7Q9HCX4 862 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 THG1LQ9NWX6 298 aaKnown RBP13.42□□□□□ -0.26
TVP23B-204ENST00000571018 CCL26Q9Y258 94 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 GREB1Q4ZG55 1949 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 OBSL1O75147 1896 aa13.42□□□□□ -0.26
TVP23B-204ENST00000571018 DENND4CQ5VZ89 1909 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 ZNF318Q5VUA4 2279 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 OLFM2O95897 454 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 CKMP06732 381 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 FAM200BP0CF97 657 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 GLULP15104 373 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 CD72P21854 359 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 ERCC5P28715 1186 aaPredicted RBP13.41□□□□□ -0.26
TVP23B-204ENST00000571018 SLC5A3P53794 718 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 YWHAEP62258 255 aaKnown RBP13.41□□□□□ -0.26
TVP23B-204ENST00000571018 IFRD2Q12894 506 aaPredicted RBP13.41□□□□□ -0.26
TVP23B-204ENST00000571018 PPP1R26Q5T8A7 1209 aaPredicted RBP13.41□□□□□ -0.26
TVP23B-204ENST00000571018 ZNF852Q6ZMS4 543 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 IRF2BP1Q8IU81 584 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 UBR7Q8N806 425 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 EHBP1Q8NDI1 1231 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 SCAMP5Q8TAC9 235 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 CSGALNACT1Q8TDX6 532 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 ZFYVE19Q96K21 471 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
TVP23B-204ENST00000571018 NT5C1BQ96P26 610 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 FOXQ1Q9C009 403 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 PNPLA8Q9NP80 782 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 LTB4R2Q9NPC1 389 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 DLGAP2Q9P1A6 1054 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
TVP23B-204ENST00000571018 COL4A2P08572 1712 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 FAM170BA6NMN3 283 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 HHLA1C9JL84 531 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 MAN2B1O00754 1011 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 OAS1P00973 400 aaKnown RBP13.4□□□□□ -0.26
TVP23B-204ENST00000571018 TCF3P15923 654 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 TCF15Q12870 199 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 CT47A1Q5JQC4 288 aaPredicted RBP13.4□□□□□ -0.26
TVP23B-204ENST00000571018 SNX30Q5VWJ9 437 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 ARHGAP17Q68EM7 881 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 RBM43Q6ZSC3 357 aaKnown RBP13.4□□□□□ -0.26
TVP23B-204ENST00000571018 CCDC105Q8IYK2 499 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 RIN3Q8TB24 985 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 MSANTD3Q96H12 275 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 FAM83CQ9BQN1 747 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 RNF38Q9H0F5 515 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 FBXO44Q9H4M3 255 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 C8orf33Q9H7E9 229 aaPredicted RBP13.4□□□□□ -0.26
TVP23B-204ENST00000571018 GKN1Q9NS71 199 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 CHORDC1Q9UHD1 332 aaPredicted RBP13.4□□□□□ -0.26
TVP23B-204ENST00000571018 ARHGAP26Q9UNA1 814 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 MRPS17Q9Y2R5 130 aaKnown RBP13.4□□□□□ -0.26
TVP23B-204ENST00000571018 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
TVP23B-204ENST00000571018 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 COL4A3Q01955 1670 aa13.4□□□□□ -0.26
TVP23B-204ENST00000571018 TRIOO75962 3097 aa13.39□□□□□ -0.27
TVP23B-204ENST00000571018 ABL1P00519 1130 aa13.39□□□□□ -0.27
TVP23B-204ENST00000571018 DCNP07585 359 aaKnown RBP13.39□□□□□ -0.27
TVP23B-204ENST00000571018 ZDHHC11BP0C7U3 371 aa13.39□□□□□ -0.27
TVP23B-204ENST00000571018 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
TVP23B-204ENST00000571018 KPNA1P52294 538 aaPredicted RBP13.39□□□□□ -0.27
TVP23B-204ENST00000571018 PTPN5P54829 565 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms