RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 A0A1W2PQD8 194 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 ZNF840PA6NDX5 716 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 OTOL1A6NHN0 477 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 PRR5-ARHGAP8B1AHC4 643 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 K7ESF4 209 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 LEFTY2O00292 366 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 MAPK13O15264 365 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 AP1G2O75843 785 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 RHOBTB3O94955 611 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 ZNF202O95125 648 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 VNN1O95497 513 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 RETP07949 1114 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 PRR29P0C7W0 189 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 CCDC192P0DO97 292 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 TCF3P15923 654 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 PSMC2P35998 433 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 CLDN10P78369 228 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 ARHGAP8P85298 464 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 DMWDQ09019 674 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 SPEM2Q0P670 501 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 DPYDQ12882 1025 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 RSPO4Q2I0M5 234 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 EML3Q32P44 896 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 HECTD3Q5T447 861 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 SV2AQ7L0J3 742 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 FAM35AQ86V20 835 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 UNC93AQ86WB7 457 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 FAM186BQ8IYM0 893 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 RIN3Q8TB24 985 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 ACDQ96AP0 544 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 ELMO3Q96BJ8 720 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 RMDN1Q96DB5 314 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 LINC00597Q9H2U6 94 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 KRT82Q9NSB4 513 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 CHORDC1Q9UHD1 332 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 ZDHHC9Q9Y397 364 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 SH3BP1Q9Y3L3 701 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 NME7Q9Y5B8 376 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 RIF1Q5UIP0 2472 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 GREB1Q4ZG55 1949 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 ANAPC1Q9H1A4 1944 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 HRO43593 1189 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 RPP40O75818 363 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 HLA-DRAP01903 254 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 CCDC130P13994 396 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 ADORA2BP29275 332 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 HOXA6P31267 233 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 GCLMP48507 274 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 PXNP49023 591 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 NDST1P52848 882 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 CACNA2D1P54289 1103 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 SLC7A9P82251 487 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 SRSF5Q13243 272 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 ORC1Q13415 861 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 ADAM9Q13443 819 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 ZACNQ401N2 412 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 WDR44Q5JSH3 913 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 SPOPLQ6IQ16 392 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 FILIP1Q7Z7B0 1213 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 WDR5BQ86VZ2 330 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 GUF1Q8N442 669 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 CAMKK1Q8N5S9 505 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 RPLP0P6Q8NHW5 317 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 SLC2A14Q8TDB8 520 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 TMEM174Q8WUU8 243 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 OVCA2Q8WZ82 227 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 KCNK16Q96T55 309 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 RNF38Q9H0F5 515 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 GDPD2Q9HCC8 539 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 FBRSL1Q9HCM7 1045 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 FAM49BQ9NUQ9 324 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 RMND1Q9NWS8 449 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 COMMD8Q9NX08 183 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 CFAP97Q9P2B7 532 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 TBC1D14Q9P2M4 693 aa9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 HOOK1Q9UJC3 728 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-204ENST00000570324 PTPRDP23468 1912 aa9.46□□□□□ -0.89
NPLOC4-204ENST00000570324 CCDC163A0A0D9SF12 145 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 FAM237AA0A1B0GTK4 181 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 SCAMP3O14828 347 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 CETN3O15182 167 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 STX10O60499 249 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 FOXD2O60548 495 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 LRP3O75074 770 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 ADH1CP00326 375 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 OAS1P00973 400 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 FAM200BP0CF97 657 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 TRIM49P0CI25 452 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 TRIM49CP0CI26 452 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 CD58P19256 250 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 SLC5A3P53794 718 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 MAP3K7CLP57077 242 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 GOLGA8FQ08AF8 430 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 GOLGA8DPQ0D2H9 430 aa9.46□□□□□ -0.9
NPLOC4-204ENST00000570324 DMC1Q14565 340 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms