RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 PHACTR1Q9C0D0 580 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TMEM161AQ9NX61 479 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TUBGCP4Q9UGJ1 667 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 USP18Q9UMW8 372 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 APOL1O14791 398 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 EIF3HO15372 352 aaKnown RBP eCLIP6.31□□□□□ -1.4
CYLD-216ENST00000569891 AOC2O75106 756 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 SLC2A3P11169 496 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 PYGMP11217 842 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 SERPINB6P35237 376 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 HSPA9P38646 679 aaKnown RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 SLC7A5Q01650 507 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 NR1H3Q13133 447 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 PTK6Q13882 451 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TMEM192Q8IY95 271 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TRPV1Q8NER1 839 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CFAP57Q96MR6 1250 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CDK5RAP1Q96SZ6 601 aaKnown RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 ROPN1BQ9BZX4 212 aaPredicted RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 DCLK3Q9C098 648 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TRPV6Q9H1D0 765 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 FAM204AQ9H8W3 233 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 ROPN1Q9HAT0 212 aaPredicted RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 COMMD8Q9NX08 183 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CITO14578 2027 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TTI1O43156 1089 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 DAB1O75553 588 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 NEBLO76041 1014 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 B3GAT3O94766 335 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CCND3P30281 292 aaPredicted RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 CD52P31358 61 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 NOS2P35228 1153 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 MLH1P40692 756 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 KRT17Q04695 432 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 C6orf118Q5T5N4 469 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 LRRC8DQ7L1W4 858 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 ECHDC2Q86YB7 292 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 UBA3Q8TBC4 463 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 EXOC4Q96A65 974 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 LENG1Q96BZ8 264 aaPredicted RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 SLC9A7Q96T83 725 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 ZNF670Q9BS34 389 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CALN1Q9BXU9 219 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 DPH5Q9H2P9 285 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CNOT10Q9H9A5 744 aaKnown RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 DMAP1Q9NPF5 467 aaPredicted RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 RGS18Q9NS28 235 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 HPCAL4Q9UM19 191 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 PCDHB8Q9UN66 801 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 OR6C75A6NL08 312 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 SGK1O00141 431 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 MDM4O15151 490 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 NCAM2O15394 837 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TADA2AO75478 443 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 RALAP11233 206 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CDH6P55285 790 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 WNT7BP56706 349 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 DHX9Q08211 1270 aaKnown RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 MGAT3Q09327 533 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CCDC14Q49A88 953 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CYP4A22Q5TCH4 519 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 OVOS1Q6IE37 1185 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 ZNF280DQ6N043 979 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 BBS12Q6ZW61 710 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CENPUQ71F23 418 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 SMG8Q8ND04 991 aaKnown RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 GABPB2Q8TAK5 448 aaPredicted RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 C2orf15Q8WU43 125 aaKnown RBP6.31□□□□□ -1.4
CYLD-216ENST00000569891 RXFP2Q8WXD0 754 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 TFAP2BQ92481 460 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 CEP295NLQ96MC4 621 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 SLITRK1Q96PX8 696 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 GOLPH3Q9H4A6 298 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 FBXO44Q9H4M3 255 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 PCDH9Q9HC56 1237 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 FAM49BQ9NUQ9 324 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 INPP5FQ9Y2H2 1132 aa6.31□□□□□ -1.4
CYLD-216ENST00000569891 ARL5CA6NH57 179 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 HACD1B0YJ81 288 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 TMEM189-UBE2V1I3L0A0 370 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 APOC4-APOC2K7ER74 178 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 TRIM66O15016 1216 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 SPAG6O75602 509 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 AP1G2O75843 785 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 SEC31AO94979 1220 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 KRT14P02533 472 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 APOC2P02655 101 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ITGAVP06756 1048 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 YY1P25490 414 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 BCAR1P56945 870 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 ROR1Q01973 937 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PKN2Q16513 984 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 SOWAHAQ2M3V2 549 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 RIBC1Q8N443 379 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 RNF139Q8WU17 664 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ALG3Q92685 438 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 RNF25Q96BH1 459 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms