RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 SH3PXD2AQ5TCZ1 1133 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 C1orf53Q5VUE5 145 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 CCDC137Q6PK04 289 aaKnown RBP23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 SPOCD1Q6ZMY3 1216 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 HDXQ7Z353 690 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 METTL23Q86XA0 190 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 JAMLQ86YT9 394 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 ACSF2Q96CM8 615 aaPredicted RBP23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 RUNDC3BQ96NL0 473 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 HEMGNQ9BXL5 484 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 HIPK3Q9H422 1215 aa23.65■■□□□ 1.38
VCPKMT-205ENST00000569518 FAM200BP0CF97 657 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 LCP1P13796 627 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 ECHS1P30084 290 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 CUL1Q13616 776 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 SMC1AQ14683 1233 aaKnown RBP23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 C15orf59Q2T9L4 293 aaPredicted RBP23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 FAM171BQ6P995 826 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 EMBQ6PCB8 327 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 CYP4V2Q6ZWL3 525 aaPredicted RBP23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 SLCO2A1Q92959 643 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 TRIM51Q9BSJ1 452 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 MED10Q9BTT4 135 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 NFU1Q9UMS0 254 aa23.64■■□□□ 1.38
VCPKMT-205ENST00000569518 TRUB2O95900 331 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 CETN2P41208 172 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 CDKN2BP42772 138 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 ADCY1Q08828 1119 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 CASP8Q14790 479 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 TAZQ16635 292 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 TRIM60Q495X7 471 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 C1orf54Q8WWF1 131 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 SCLYQ96I15 445 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 CFAP57Q96MR6 1250 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 PEBP4Q96S96 227 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 C11orf84Q9BUA3 381 aaPredicted RBP23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 DCLK3Q9C098 648 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 ZWILCHQ9H900 591 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 TMEM30AQ9NV96 361 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 USP18Q9UMW8 372 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 PCDHB8Q9UN66 801 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 R3HDM2Q9Y2K5 976 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 hCG_1818297A0A087WSY0 165 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 ARHGEF37A1IGU5 675 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 LRRD1A4D1F6 860 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 DCDC2CA8MYV0 355 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 PTPN9P43378 593 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 TLE2Q04725 743 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 ADCY2Q08462 1091 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 ADIGQ0VDE8 80 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 SMTNL2Q2TAL5 461 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 RAB6CQ53S08 254 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 INTS6LQ5JSJ4 861 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 OVOS1Q6IE37 1185 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 IFT81Q8WYA0 676 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 CAVIN3Q969G5 261 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 SMOQ99835 787 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 RAB6CQ9H0N0 254 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 RAB17Q9H0T7 212 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 CHST7Q9NS84 486 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 DNAJB4Q9UDY4 337 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 UTP11Q9Y3A2 253 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 PCDHB7Q9Y5E2 793 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 NLRC5Q86WI3 1866 aa23.63■■□□□ 1.37
VCPKMT-205ENST00000569518 PTPRDP23468 1912 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 PARNO95453 639 aaKnown RBP23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 SDC4P31431 198 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 KCTD19Q17RG1 926 aaPredicted RBP23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 TFDP3Q5H9I0 405 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 DUPD1Q68J44 220 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 ZMIZ2Q8NF64 920 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 CMASQ8NFW8 434 aaPredicted RBP23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 OR10T2Q8NGX3 314 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 ATG4AQ8WYN0 398 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 CASD1Q96PB1 797 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 ERP44Q9BS26 406 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 PCSK1NQ9UHG2 260 aa23.62■■□□□ 1.37
VCPKMT-205ENST00000569518 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 AP1G2O75843 785 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 KRT10P13645 584 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 CACNA2D1P54289 1103 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 MAP3K7CLP57077 242 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 RNASELQ05823 741 aaKnown RBP23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 KCNT1Q5JUK3 1230 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 ZFYVE27Q5T4F4 411 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 CTU1Q7Z7A3 348 aaKnown RBP23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 DDX42Q86XP3 938 aaKnown RBP eCLIP23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 DIS3LQ8TF46 1054 aaKnown RBP23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 MYLPFQ96A32 169 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 HOMER3Q9NSC5 361 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 EFR3BQ9Y2G0 817 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 DAPK3O43293 454 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 NNTQ13423 1086 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 CENPIQ92674 756 aaPredicted RBP23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 ARMC5Q96C12 935 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 SMARCD1Q96GM5 515 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 CSNK1G1Q9HCP0 422 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 RASAL2Q9UJF2 1139 aa23.61■■□□□ 1.37
VCPKMT-205ENST00000569518 TBX21Q9UL17 535 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms