RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 TAF12Q16514 161 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 ITPRIPL2Q3MIP1 535 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 VWA3BQ502W6 1294 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 SLC39A12Q504Y0 691 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 FKBP15Q5T1M5 1219 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 C12orf50Q8NA57 414 aaPredicted RBP16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 LRRC3BQ96PB8 259 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 VPS16Q9H269 839 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 NDST4Q9H3R1 872 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 INTS13Q9NVM9 706 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 C2orf42Q9NWW7 574 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 DSEQ9UL01 958 aa16.52■□□□□ 0.24
SCAMP2-210ENST00000569124 ABCA7Q8IZY2 2146 aa16.52■□□□□ 0.23
SCAMP2-210ENST00000569124 MYOFQ9NZM1 2061 aa16.52■□□□□ 0.23
SCAMP2-210ENST00000569124 CBFA2T2O43439 604 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 CLSTN1O94985 981 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 NFICP08651 508 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 WEE1P30291 646 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 MXI1P50539 228 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 CLDN10P78369 228 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 FANCCQ00597 558 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 TNK2Q07912 1038 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 C9orf57Q5W0N0 161 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 KRT39Q6A163 491 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 METTL23Q86XA0 190 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 OR10T2Q8NGX3 314 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 MTMR12Q9C0I1 747 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 TMEM8AQ9HCN3 771 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 ZMYM5Q9UJ78 669 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 MYH10P35580 1976 aa16.51■□□□□ 0.23
SCAMP2-210ENST00000569124 LRRC10BA6NIK2 292 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 CYP11A1P05108 521 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 ATF6P18850 670 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 GCLMP48507 274 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 FMO5P49326 533 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 WNT7BP56706 349 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 UBASH3AP57075 661 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 MCCD1P59942 119 aaPredicted RBP16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 MYL7Q01449 175 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 TRPC3Q13507 836 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 GSE1Q14687 1217 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 EFCAB13Q8IY85 973 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 CCDC150Q8NCX0 1101 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 SPPL2BQ8TCT7 592 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 C2orf15Q8WU43 125 aaKnown RBP16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 GAB3Q8WWW8 586 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 ZCWPW1Q9H0M4 648 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 SMG9Q9H0W8 520 aaKnown RBP16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 ITGA11Q9UKX5 1188 aa16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 MYO18AQ92614 2054 aaKnown RBP16.5■□□□□ 0.23
SCAMP2-210ENST00000569124 TNRC6BQ9UPQ9 1833 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 PLXND1Q9Y4D7 1925 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 P4HA2O15460 535 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 RPP40O75818 363 aaKnown RBP16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 KRT19P08727 400 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 AVPR1AP37288 418 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 PIK3CAP42336 1068 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 LIMK1P53667 647 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 SMARCB1Q12824 385 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 THEM5Q8N1Q8 247 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 LOXL4Q96JB6 756 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 IMPG2Q9BZV3 1241 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 IL21Q9HBE4 155 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 DPP3Q9NY33 737 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 ABI2Q9NYB9 513 aaPredicted RBP16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
SCAMP2-210ENST00000569124 PTPRJQ12913 1337 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 CCDC163A0A0D9SF12 145 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 LGALS16A8MUM7 142 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 PIRO00625 290 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 AXIN1O15169 862 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 ATG13O75143 517 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 EPN2O95208 641 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 TAF6P49848 677 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 UBXN1Q04323 297 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 PPP3CAQ08209 521 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 GRSF1Q12849 480 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 SF3A2Q15428 464 aaKnown RBP16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 MIIPQ5JXC2 388 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 C1orf220Q5T0J3 134 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 SV2AQ7L0J3 742 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 CMTM8Q8IZV2 173 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 FBXL13Q8NEE6 735 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 OR5B17Q8NGF7 314 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 GIPC2Q8TF65 315 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 ZNF516Q92618 1163 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 KIF9Q9HAQ2 790 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 GKN1Q9NS71 199 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 IFNKQ9P0W0 207 aa16.48■□□□□ 0.23
SCAMP2-210ENST00000569124 A0A1B0GTH6 734 aa16.47■□□□□ 0.23
SCAMP2-210ENST00000569124 ANO9A1A5B4 782 aa16.47■□□□□ 0.23
SCAMP2-210ENST00000569124 GTPBP10A4D1E9 387 aaKnown RBP16.47■□□□□ 0.23
SCAMP2-210ENST00000569124 CYB561D2O14569 222 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms