RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PDGFRAP16234 1089 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 RBL1P28749 1068 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 PGM1P36871 562 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 GRIA1P42261 906 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 SESN2P58004 480 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 TGFB2P61812 414 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 ZNF200P98182 395 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 ZNF667Q5HYK9 610 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 SNX30Q5VWJ9 437 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 ZNF677Q86XU0 584 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 PHF13Q86YI8 300 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 SLCO2A1Q92959 643 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 GRAMD1AQ96CP6 724 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 MRIQ9BWK5 157 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 UNKQ9C0B0 810 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 LRMDAQ9H2I8 198 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 PCDH9Q9HC56 1237 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 NMRK1Q9NWW6 199 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 ALOX15BO15296 676 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 NVLO15381 856 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 PDE5AO76074 875 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 KDELR1P24390 212 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 RIPK1Q13546 671 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ACSBG2Q5FVE4 666 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 GLRA4Q5JXX5 417 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ANGEL2Q5VTE6 544 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ABHD15Q6UXT9 468 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 TRIM72Q6ZMU5 477 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 GADL1Q6ZQY3 521 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ARFGAP1Q8N6T3 406 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 LPAR1Q92633 364 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 MOCOSQ96EN8 888 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ST6GALNAC4Q9H4F1 302 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ACAD9Q9H845 621 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ZFATQ9P243 1243 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ZC3H7BQ9UGR2 993 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 USP18Q9UMW8 372 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 SLX4Q8IY92 1834 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 A0A0B4J269 797 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 UBA1P22314 1058 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 PGGT1BP53609 377 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 AQP5P55064 265 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 RPL10AP62906 217 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 RASA2Q15283 850 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 OASLQ15646 514 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 STXBP2Q15833 593 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 TRMT10BQ6PF06 316 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 NDUFAF2Q8N183 169 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 DENND1AQ8TEH3 1009 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 SRPK1Q96SB4 655 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 PORCNQ9H237 461 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 KANSL3Q9P2N6 904 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 TTLL3Q9Y4R7 772 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 SIPA1L1O43166 1804 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 TYROBPO43914 113 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 PRPSAP2O60256 369 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 STK10O94804 968 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 HMGCRP04035 888 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 CCNB1P14635 433 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 PTPN4P29074 926 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 SERPINB4P48594 390 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 BACE1P56817 501 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 DPYSL3Q14195 570 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 SLFN12LQ6IEE8 588 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ZBTB8OSQ8IWT0 167 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 MPP5Q8N3R9 675 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ZNF280CQ8ND82 737 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 MAGEC3Q8TD91 643 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 ANKRD36BP1Q96IX9 119 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 B3GNT5Q9BYG0 378 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 TAF1LQ8IZX4 1826 aa9.35□□□□□ -0.91
HDGFL3-206ENST00000568294 CNTNAP2Q9UHC6 1331 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 IQANK1A0A1B0GTG1 560 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 DKC1O60832 514 aaKnown RBP eCLIP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 SORBS2O94875 1100 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 STBD1O95210 358 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 ASS1P00966 412 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 POLR2BP30876 1174 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 GMPSP49915 693 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 RABGGTBP53611 331 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 OLIG2Q13516 323 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 PIGHQ14442 188 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 KLHL38Q2WGJ6 581 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 HSDL1Q3SXM5 330 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 CFAP157Q5JU67 520 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 IL31Q6EBC2 164 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 ANO7Q6IWH7 933 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 C15orf39Q6ZRI6 1047 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 IFNLR1Q8IU57 520 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 NUDCD3Q8IVD9 361 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 RXFP2Q8WXD0 754 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 GPRASP2Q96D09 838 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 AGAP3Q96P47 875 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 PEBP4Q96S96 227 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 EBF4Q9BQW3 602 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 TIPINQ9BVW5 301 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 TEX13BQ9BXU2 312 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 MRPL4Q9BYD3 311 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms