RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 TSPY26PQ9H489 355 aa18.2■□□□□ 0.5
COMMD4-220ENST00000567720 FAM207AQ9NSI2 230 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-220ENST00000567720 IL37Q9NZH6 218 aa18.2■□□□□ 0.5
COMMD4-220ENST00000567720 FAM92AA1XBS5 289 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 TEX33O43247 280 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 RTN3O95197 1032 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-220ENST00000567720 PRAMEF12O95522 483 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 GNA15P30679 374 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 TAF10Q12962 218 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 RAPGEF1Q13905 1077 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 PKDCCQ504Y2 493 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 ARHGAP15Q53QZ3 475 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 LCLAT1Q6UWP7 414 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 MTSS1LQ765P7 747 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 ANKRD52Q8NB46 1076 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 RPP25Q9BUL9 199 aaKnown RBP18.19■□□□□ 0.5
COMMD4-220ENST00000567720 TASP1Q9H6P5 420 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 IGSF9Q9P2J2 1179 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 KIAA1257Q9ULG3 409 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 SORCS3Q9UPU3 1222 aa18.19■□□□□ 0.5
COMMD4-220ENST00000567720 A0A1B0GTH6 734 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 F8VZ95 297 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 M0QYV0 167 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 YWHAQP27348 245 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 USP8P40818 1118 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 ZNF445P59923 1031 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 PDE4CQ08493 712 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 BST2Q10589 180 aaKnown RBP18.18■□□□□ 0.5
COMMD4-220ENST00000567720 DRAP1Q14919 205 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-220ENST00000567720 TXNDC8Q6A555 127 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 PIGZQ86VD9 579 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 MRPS31Q92665 395 aaKnown RBP18.18■□□□□ 0.5
COMMD4-220ENST00000567720 SMARCD2Q92925 531 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 FBXO32Q969P5 355 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 RSPRY1Q96DX4 576 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
COMMD4-220ENST00000567720 EHD2Q9NZN4 543 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 GMIPQ9P107 970 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 HESX1Q9UBX0 185 aa18.18■□□□□ 0.5
COMMD4-220ENST00000567720 C2orf78A6NCI8 922 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 FOXN3O00409 490 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-220ENST00000567720 XPO1O14980 1071 aaKnown RBP18.17■□□□□ 0.5
COMMD4-220ENST00000567720 CYP26A1O43174 497 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 DCXO43602 365 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 NARSO43776 548 aaKnown RBP18.17■□□□□ 0.5
COMMD4-220ENST00000567720 SETSIPP0DME0 302 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 DDX6P26196 483 aaKnown RBP eCLIP18.17■□□□□ 0.5
COMMD4-220ENST00000567720 STILQ15468 1287 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 TANGO2Q6ICL3 276 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 FAM71AQ8IYT1 594 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 MAB21L3Q8N8X9 362 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 UBA3Q8TBC4 463 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 NAP1L5Q96NT1 182 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-220ENST00000567720 SLITRK1Q96PX8 696 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 SLC46A2Q9BY10 475 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 PLA2G2FQ9BZM2 168 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 SMG9Q9H0W8 520 aaKnown RBP18.17■□□□□ 0.5
COMMD4-220ENST00000567720 TRPV4Q9HBA0 871 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
COMMD4-220ENST00000567720 ZNF840PA6NDX5 716 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 GOLGA6L19H0YKK7 550 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 DLL1O00548 723 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 THAP12O43422 761 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 ECI2O75521 394 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 CFHP08603 1231 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 CLCN1P35523 988 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 VIPR2P41587 438 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 PLA2G4AP47712 749 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 PGFP49763 221 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 KIF11P52732 1056 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 JAM2P57087 298 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 POLR2FP61218 127 aaKnown RBP18.16■□□□□ 0.5
COMMD4-220ENST00000567720 TPM4P67936 248 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 CNGA2Q16280 664 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 RAB41Q5JT25 222 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 SMYD5Q6GMV2 418 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 VITQ6UXI7 678 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 MON1AQ86VX9 555 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 ARID3BQ8IVW6 561 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-220ENST00000567720 CMTM8Q8IZV2 173 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 OVCA2Q8WZ82 227 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 SECISBP2LQ93073 1101 aaKnown RBP18.16■□□□□ 0.5
COMMD4-220ENST00000567720 NXPE3Q969Y0 559 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 ELSPBP1Q96BH3 223 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 NLRC4Q9NPP4 1024 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 COMMD8Q9NX08 183 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 TRPM5Q9NZQ8 1165 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 DUSP12Q9UNI6 340 aa18.16■□□□□ 0.5
COMMD4-220ENST00000567720 OAS1P00973 400 aaKnown RBP18.15■□□□□ 0.5
COMMD4-220ENST00000567720 ZDHHC11BP0C7U3 371 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 WEE1P30291 646 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 FANCCQ00597 558 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 TDGQ13569 410 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 MEA1Q16626 185 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 DENND1BQ6P3S1 775 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 SLC47A2Q86VL8 602 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 GPIHBP1Q8IV16 184 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 SLC44A3Q8N4M1 653 aa18.15■□□□□ 0.5
COMMD4-220ENST00000567720 PDZD8Q8NEN9 1154 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms