RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TADA3O75528 432 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 PRAMEF12O95522 483 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 ZDHHC11BP0C7U3 371 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 CCNE1P24864 410 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 YWHAQP27348 245 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 EIF2DP41214 584 aaKnown RBP11.88□□□□□ -0.51
CDH3-206ENST00000567674 CXCL12P48061 93 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 PSEN1P49768 467 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 DLG4P78352 724 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 GRSF1Q12849 480 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDH3-206ENST00000567674 USP4Q13107 963 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 MTF1Q14872 753 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 C1orf220Q5T0J3 134 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 SCARA3Q6AZY7 606 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 KLHDC10Q6PID8 442 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 FILIP1Q7Z7B0 1213 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 FBXL13Q8NEE6 735 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 RUBCNQ92622 972 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 HINFPQ9BQA5 517 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 NT5C1AQ9BXI3 368 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 B3GNT5Q9BYG0 378 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 NIF3L1Q9GZT8 377 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 TBC1D14Q9P2M4 693 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 KIAA1257Q9ULG3 409 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 COL4A2P08572 1712 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 CFAP47Q6ZTR5 3102 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 PKD1L2Q7Z442 2459 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 NCOR2Q9Y618 2525 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 E2F8A0AVK6 867 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 BICDL2A1A5D9 508 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 NFATC1O95644 943 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 GNA14O95837 355 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 OAS1P00973 400 aaKnown RBP11.87□□□□□ -0.51
CDH3-206ENST00000567674 CKMP06732 381 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 PIK3CAP42336 1068 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 PRCPP42785 496 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 ASPAP45381 313 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
CDH3-206ENST00000567674 YWHAEP62258 255 aaKnown RBP11.87□□□□□ -0.51
CDH3-206ENST00000567674 CETN1Q12798 172 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 RSPO4Q2I0M5 234 aaPredicted RBP11.87□□□□□ -0.51
CDH3-206ENST00000567674 TMEM196Q5HYL7 178 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 WDR44Q5JSH3 913 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 CAMKK1Q8N5S9 505 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 SECISBP2LQ93073 1101 aaKnown RBP11.87□□□□□ -0.51
CDH3-206ENST00000567674 CDK5RAP1Q96SZ6 601 aaKnown RBP11.87□□□□□ -0.51
CDH3-206ENST00000567674 EPC1Q9H2F5 836 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 RAB20Q9NX57 234 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 PCDHA5Q9Y5H7 936 aa11.87□□□□□ -0.51
CDH3-206ENST00000567674 FRYLO94915 3013 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 LRP3O75074 770 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 CILPO75339 1184 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 FGFR1OPO95684 399 aaKnown RBP11.86□□□□□ -0.51
CDH3-206ENST00000567674 TDGF1P13385 188 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 CD72P21854 359 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 IFNAR2P48551 515 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 GPR15P49685 360 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 MXI1P50539 228 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 NDST1P52848 882 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 CDH8P55286 799 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 SLC8A3P57103 927 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 TAF10Q12962 218 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 MTAPQ13126 283 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 PNOCQ13519 176 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 HSF5Q4G112 596 aaPredicted RBP11.86□□□□□ -0.51
CDH3-206ENST00000567674 PAQR9Q6ZVX9 377 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 FAM35AQ86V20 835 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 FUKQ8N0W3 1084 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 SMYD3Q9H7B4 428 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 ECT2Q9H8V3 914 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 TLR8Q9NR97 1041 aaKnown RBP11.86□□□□□ -0.51
CDH3-206ENST00000567674 DUS2Q9NX74 493 aaKnown RBP11.86□□□□□ -0.51
CDH3-206ENST00000567674 GTSE1Q9NYZ3 720 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
CDH3-206ENST00000567674 NME7Q9Y5B8 376 aa11.86□□□□□ -0.51
CDH3-206ENST00000567674 KIF26AQ9ULI4 1882 aaPredicted RBP11.86□□□□□ -0.51
CDH3-206ENST00000567674 FAM200BP0CF97 657 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 TBXAS1P24557 533 aaPredicted RBP11.85□□□□□ -0.51
CDH3-206ENST00000567674 MARSP56192 900 aaKnown RBP11.85□□□□□ -0.51
CDH3-206ENST00000567674 CSTF1Q05048 431 aaKnown RBP11.85□□□□□ -0.51
CDH3-206ENST00000567674 PPP3CAQ08209 521 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 EML3Q32P44 896 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 HECTD3Q5T447 861 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 ADGRG2Q8IZP9 1017 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 ARL14EPQ8N8R7 260 aaPredicted RBP11.85□□□□□ -0.51
CDH3-206ENST00000567674 SUMF1Q8NBK3 374 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 ST13P5Q8NFI4 369 aaPredicted RBP11.85□□□□□ -0.51
CDH3-206ENST00000567674 TAS1R2Q8TE23 839 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 SH3RF2Q8TEC5 729 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 JAKMIP2Q96AA8 810 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms