RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 INHBAP08476 426 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 TNNI1P19237 187 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 SFNP31947 248 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 FAM81AQ8TBF8 368 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 CLPTM1LQ96KA5 538 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 SRPK1Q96SB4 655 aaKnown RBP16.36■□□□□ 0.21
COMMD4-215ENST00000566843 THTPAQ9BU02 230 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 C10orf88Q9H8K7 445 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 HERC5Q9UII4 1024 aaKnown RBP16.36■□□□□ 0.21
COMMD4-215ENST00000566843 FEM1BQ9UK73 627 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 PPM1HQ9ULR3 514 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 CHMP2BQ9UQN3 213 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 IKBKGQ9Y6K9 419 aa16.36■□□□□ 0.21
COMMD4-215ENST00000566843 WDR64B1ANS9 1081 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 COPEO14579 308 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 CCNE2O96020 404 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 C1QAP02745 245 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 PABPC4LP0CB38 370 aaKnown RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 ELK3P41970 407 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 MAP3K10Q02779 954 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 BST1Q10588 318 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 KBTBD12Q3ZCT8 623 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 PABPC1LQ4VXU2 614 aaKnown RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 ATG16L1Q676U5 607 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 PDSS2Q86YH6 399 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 ST13P4Q8IZP2 240 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 RSAD2Q8WXG1 361 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 MTBPQ96DY7 904 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 MKS1Q9NXB0 559 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 SIRPGQ9P1W8 387 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 SAE1Q9UBE0 346 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 PLLPQ9Y342 182 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 TEX264Q9Y6I9 313 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 STYXL1Q9Y6J8 313 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 PENKP01210 267 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 CCNFP41002 786 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 SH3BGRP55822 239 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 GRM2Q14416 872 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 TEX44Q53QW1 395 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 TTC39BQ5VTQ0 682 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 DCUN1D2Q6PH85 259 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 CDHR3Q6ZTQ4 885 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 UNC45BQ8IWX7 931 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 RAB3IL1Q8TBN0 382 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 FAM172AQ8WUF8 416 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 TTC1Q99614 292 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 UBE2OQ9C0C9 1292 aaKnown RBP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
COMMD4-215ENST00000566843 S100A14Q9HCY8 104 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 ARHGAP28Q9P2N2 729 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 NUB1Q9Y5A7 615 aa16.35■□□□□ 0.21
COMMD4-215ENST00000566843 CST8O60676 142 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 CSDE1O75534 798 aaKnown RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ICAM1P05362 532 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 CPOXP36551 454 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 RPL26P61254 145 aaKnown RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 TGFB2P61812 414 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 XIAPP98170 497 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 KRT76Q01546 638 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 SLC25A11Q02978 314 aaKnown RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 LRRC23Q53EV4 343 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 C1orf146Q5VVC0 180 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 CES4AQ5XG92 561 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 PRPF39Q86UA1 669 aaKnown RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 THNSL1Q8IYQ7 743 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ITFG2Q969R8 447 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 E2F7Q96AV8 911 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 OPTNQ96CV9 577 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 AGBL1Q96MI9 1066 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 FAM210AQ96ND0 272 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 EBF3Q9H4W6 596 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 TDRD3Q9H7E2 651 aaKnown RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 SORCS3Q9UPU3 1222 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 A0A088AWK7 358 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 KBTBD13C9JR72 458 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 USP1O94782 785 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 BAG2O95816 211 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 SERPINA6P08185 405 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 SOX10P56693 466 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 DPYSL3Q14195 570 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ANGEL2Q5VTE6 544 aaKnown RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 RAPH1Q70E73 1250 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 SLC26A11Q86WA9 606 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ARID3BQ8IVW6 561 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-215ENST00000566843 RDM1Q8NG50 284 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 OR6Y1Q8NGX8 325 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 APBB2Q92870 758 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 FBXO28Q9NVF7 368 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ATXN10Q9UBB4 475 aa16.34■□□□□ 0.21
COMMD4-215ENST00000566843 ZNF180Q9UJW8 692 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms