RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 EPHX2P34913 555 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 TAF1CQ15572 869 aaPredicted RBP12.06□□□□□ -0.48
CDH1-210ENST00000566612 GRIK4Q16099 956 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 ZDHHC24Q6UX98 284 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 MON1BQ7L1V2 547 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 CCNYL1Q8N7R7 359 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 TUBB6Q9BUF5 446 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 KDM4CQ9H3R0 1056 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 SIGLEC16A6NMB1 481 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 SPECC1L-ADORA2AF8WAN1 911 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 DFFAO00273 331 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 ZWINTO95229 277 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 MCF2P10911 925 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 RASSF3Q86WH2 238 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 ABI1Q8IZP0 508 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 NETO2Q8NC67 525 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 TCP10LQ8TDR4 215 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 CCDC124Q96CT7 223 aaKnown RBP12.06□□□□□ -0.48
CDH1-210ENST00000566612 DDX27Q96GQ7 796 aaKnown RBP12.06□□□□□ -0.48
CDH1-210ENST00000566612 TTC1Q99614 292 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 GPR88Q9GZN0 384 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
CDH1-210ENST00000566612 HEY2Q9UBP5 337 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 SOWAHBA6NEL2 793 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 TNPO2O14787 897 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 VNN1O95497 513 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 NCAM1P13591 858 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 ACO1P21399 889 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 RPA3P35244 121 aaPredicted RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 ARL2P36404 184 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 MMP13P45452 471 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 NLRP9Q7RTR0 991 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 FBXO41Q8TF61 875 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 TFAP2BQ92481 460 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 APOL2Q9BQE5 337 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 RNPEPQ9H4A4 650 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 SLCO1B3Q9NPD5 702 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDH1-210ENST00000566612 AFG3L2Q9Y4W6 797 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 GRIN2DO15399 1336 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 PDHXO00330 501 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 SNX3O60493 162 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 USP2O75604 605 aaPredicted RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 CD4P01730 458 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 HMGCRP04035 888 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 CETPP11597 493 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 NQO1P15559 274 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 ADRA1DP25100 572 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 RBL1P28749 1068 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 GCKP35557 465 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 TAF6P49848 677 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 STX3Q13277 289 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 CHI3L2Q15782 390 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 PLEKHA7Q6IQ23 1121 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 MTDHQ86UE4 582 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 RNF135Q8IUD6 432 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 DNAJB3Q8WWF6 145 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 CCT6BQ92526 530 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 CPXM1Q96SM3 734 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 ASB7Q9H672 318 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 UBQLN1Q9UMX0 589 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 AP4E1Q9UPM8 1137 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 MAFBQ9Y5Q3 323 aaPredicted RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 hCG_1818297A0A087WSY0 165 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 EEF2KO00418 725 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 PPP1R12AO14974 1030 aaPredicted RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 UNGP13051 313 aaPredicted RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 POU5F1BQ06416 359 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 FASTKD3Q14CZ7 662 aaKnown RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 SPDYCQ5MJ68 293 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 EXT2Q93063 718 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 SHCBP1LQ9BZQ2 653 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 VCXQ9H320 206 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 ZDHHC18Q9NUE0 388 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 TMEM51Q9NW97 253 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 CPA4Q9UI42 421 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 LRP5O75197 1615 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 COL4A1P02462 1669 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 NHSL1Q5SYE7 1610 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.05□□□□□ -0.48
CDH1-210ENST00000566612 GIPC1O14908 333 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 RPS6KA2Q15349 733 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 AFAP1L2Q8N4X5 818 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 ADAM32Q8TC27 787 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 GPR20Q99678 358 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 KIAA1257Q9ULG3 409 aa12.05□□□□□ -0.48
CDH1-210ENST00000566612 IQCA1LA6NCM1 817 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 TCF4P15884 667 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 BGNP21810 368 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 CYP2F1P24903 491 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 ATICP31939 592 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 ZNF280AP59817 542 aaPredicted RBP12.04□□□□□ -0.48
CDH1-210ENST00000566612 DPYSL3Q14195 570 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 MMEL1Q495T6 779 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms