RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 ELOVL4Q9GZR5 314 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 PTPRDP23468 1912 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 ATP8B3O60423 1300 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 LEFTY2O00292 366 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 SLC9A3R1O14745 358 aaPredicted RBP12.71□□□□□ -0.37
UBR1-206ENST00000566493 SLC30A4O14863 429 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 AKAP3O75969 853 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
UBR1-206ENST00000566493 AP3M2P53677 418 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 MYL6P60660 151 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 EHHADHQ08426 723 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 IFRD2Q12894 506 aaPredicted RBP12.71□□□□□ -0.37
UBR1-206ENST00000566493 SYT13Q7L8C5 426 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 C12orf56Q8IXR9 622 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 C12orf50Q8NA57 414 aaPredicted RBP12.71□□□□□ -0.37
UBR1-206ENST00000566493 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 ZNF516Q92618 1163 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 HHIPQ96QV1 700 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 TTLL2Q9BWV7 592 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 ARRDC1-AS1Q9H2J1 176 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 LINC00597Q9H2U6 94 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 DPEP3Q9H4B8 488 aa12.71□□□□□ -0.37
UBR1-206ENST00000566493 RTN3O95197 1032 aaPredicted RBP12.7□□□□□ -0.38
UBR1-206ENST00000566493 APBB3O95704 486 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 SLC7A9P82251 487 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 TAF10Q12962 218 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 DMC1Q14565 340 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 AASDHQ4L235 1098 aaPredicted RBP12.7□□□□□ -0.38
UBR1-206ENST00000566493 ZNF667Q5HYK9 610 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 NAIF1Q69YI7 327 aaPredicted RBP12.7□□□□□ -0.38
UBR1-206ENST00000566493 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBR1-206ENST00000566493 NUP93Q8N1F7 819 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 KIAA1958Q8N8K9 716 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 PDZD8Q8NEN9 1154 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 ZNF518BQ9C0D4 1074 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 EXOC1Q9NV70 894 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
UBR1-206ENST00000566493 CLDN5O00501 218 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 EPN2O95208 641 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 SLFN14P0C7P3 912 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
UBR1-206ENST00000566493 P4HA1P13674 534 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 YWHAQP27348 245 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 CASP4P49662 377 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 NCOA4Q13772 614 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 ELF2Q15723 593 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 GRAMD1CQ8IYS0 662 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 DDX1Q92499 740 aaKnown RBP12.69□□□□□ -0.38
UBR1-206ENST00000566493 ZC3H10Q96K80 434 aaKnown RBP12.69□□□□□ -0.38
UBR1-206ENST00000566493 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 POLR3BQ9NW08 1133 aaPredicted RBP12.69□□□□□ -0.38
UBR1-206ENST00000566493 SMPD4Q9NXE4 827 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 SERTAD1Q9UHV2 236 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 CPQQ9Y646 472 aa12.69□□□□□ -0.38
UBR1-206ENST00000566493 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 GDF9O60383 454 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 RHOBTB1O94844 696 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
UBR1-206ENST00000566493 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 TRIM21P19474 475 aaKnown RBP12.68□□□□□ -0.38
UBR1-206ENST00000566493 RAP1GAPP47736 663 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 DGKEP52429 567 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 CDH8P55286 799 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 SEC13P55735 322 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
UBR1-206ENST00000566493 SGSM1Q2NKQ1 1148 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 C2orf27AQ580R0 203 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 PPM1JQ5JR12 505 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 TSTD1Q8NFU3 115 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 PARD3BQ8TEW8 1205 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 OVCA2Q8WZ82 227 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 EZH1Q92800 747 aaPredicted RBP12.68□□□□□ -0.38
UBR1-206ENST00000566493 FBXO32Q969P5 355 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 PAGE5Q96GU1 130 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 GZF1Q9H116 711 aaPredicted RBP12.68□□□□□ -0.38
UBR1-206ENST00000566493 SMYD3Q9H7B4 428 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 TBC1D14Q9P2M4 693 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 EBF1Q9UH73 591 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 USP25Q9UHP3 1055 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 RCOR1Q9UKL0 485 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 PCDHGA5Q9Y5G8 931 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms