RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 GPR87Q9BY21 358 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 WASH6PQ9NQA3 447 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 RNF181Q9P0P0 153 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 SWAP70Q9UH65 585 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 SLC13A4Q9UKG4 626 aa5.79□□□□□ -1.48
CNOT1-209ENST00000566240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.79□□□□□ -1.48
CNOT1-209ENST00000566240 PRAMEF33A0A0G2JMD5 474 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 F5H697 171 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 J3KTA2 159 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 ZSCAN9O15535 394 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-209ENST00000566240 PRAMEF10O60809 474 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 CENPBP07199 599 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-209ENST00000566240 HGFP14210 728 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 KLRK1P26718 216 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 PRKAR1BP31321 381 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 MAN1A1P33908 653 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 CNR2P34972 360 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 AARSP49588 968 aaKnown RBP eCLIP5.78□□□□□ -1.48
CNOT1-209ENST00000566240 CCNIQ14094 377 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 GRM4Q14833 912 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 PDCD4Q53EL6 469 aaKnown RBP5.78□□□□□ -1.48
CNOT1-209ENST00000566240 RGS7BPQ6MZT1 257 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-209ENST00000566240 RINT1Q6NUQ1 792 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 CPOQ8IVL8 374 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 MAPKAPK5Q8IW41 473 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 OR6Y1Q8NGX8 325 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 TMEM171Q8WVE6 324 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 HERVK_113Q902F9 699 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 SDCCAG3Q96C92 435 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 TRAPPC9Q96Q05 1148 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 HIST1H2AAQ96QV6 131 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 SLC26A6Q9BXS9 759 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 EIF2B4Q9UI10 523 aaKnown RBP5.78□□□□□ -1.48
CNOT1-209ENST00000566240 VPS51Q9UID3 782 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 DAPP1Q9UN19 280 aa5.78□□□□□ -1.48
CNOT1-209ENST00000566240 PNMA6EA0A0J9YXQ4 647 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 A0A1W2PS29 197 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 H0Y3Z8 333 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 HOXC11O43248 304 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 MBD4O95243 580 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 PRKCBP05771 671 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 CSF1RP07333 972 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 ELANEP08246 267 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 JUPP14923 745 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 XBP1P17861 261 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 UQCRC1P31930 480 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 CASP2P42575 452 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 NPTX2P47972 431 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 GATMP50440 423 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 PGDP52209 483 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 ACTR2P61160 394 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 RPS7P62081 194 aaKnown RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 MPP1Q00013 466 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 TLE2Q04725 743 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 FPGSQ05932 587 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 FOXD4Q12950 439 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 HLXQ14774 488 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 CD300EQ496F6 205 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 PREPLQ4J6C6 727 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 TBC1D10BQ4KMP7 808 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 RBM20Q5T481 1227 aaKnown RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 CERCAMQ5T4B2 595 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 Q6ZRM9 215 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 RRAGAQ7L523 313 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 RAB11FIP2Q7L804 512 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 C1QL4Q86Z23 238 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 CSGALNACT1Q8TDX6 532 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 WDR60Q8WVS4 1066 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 ZBTB45Q96K62 511 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-209ENST00000566240 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 ZCWPW1Q9H0M4 648 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 UNC45AQ9H3U1 944 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 KCNE5Q9UJ90 142 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 SSX2IPQ9Y2D8 614 aa5.77□□□□□ -1.49
CNOT1-209ENST00000566240 XDHP47989 1333 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 ADM5C9JUS6 153 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 CYP27B1O15528 508 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 GPR42O15529 346 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 DHHO43323 396 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 TRIAP1O43715 76 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 SNX2O60749 519 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 RPS6KA4O75676 772 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 LMNAP02545 664 aaKnown RBP5.76□□□□□ -1.49
CNOT1-209ENST00000566240 TK1P04183 234 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 FAM163BP0C2L3 166 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 ADORA2AP29274 412 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 CD6P30203 668 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 NTSR1P30989 418 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 AKT1P31749 480 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 MAN2A2P49641 1150 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 SCNN1GP51170 649 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 FHL3Q13643 280 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 BTBD16Q32M84 506 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 TRIM60Q495X7 471 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 HYIQ5T013 277 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 VPS53Q5VIR6 699 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 ICE2Q659A1 982 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 NFRKBQ6P4R8 1299 aa5.76□□□□□ -1.49
CNOT1-209ENST00000566240 MICALCLQ6ZW33 695 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms