RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 XPO1O14980 1071 aaKnown RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 TBX10O75333 385 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 RFPL2O75678 378 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 GABBR2O75899 941 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 SOAT2O75908 522 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 CYP1A1P04798 512 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 SERPING1P05155 500 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 SETSIPP0DME0 302 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 HMGA1P17096 107 aaKnown RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 PLA2G4AP47712 749 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 GPR15P49685 360 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 PDE6CP51160 858 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 BCAT1P54687 386 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 MAP3K7CLP57077 242 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 FMO1Q01740 532 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 ARID5AQ03989 594 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 ITIH3Q06033 890 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 PDE4CQ08493 712 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 BST2Q10589 180 aaKnown RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 CCDC85BQ15834 202 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 ASIC2Q16515 512 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 DENND1BQ6P3S1 775 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 DNAJB7Q7Z6W7 309 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 TMEM110Q86TL2 294 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 KRT222Q8N1A0 295 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 MICALL1Q8N3F8 863 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 C12orf76Q8N812 135 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 SLC30A5Q8TAD4 765 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 TSC1Q92574 1164 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 SECISBP2LQ93073 1101 aaKnown RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 PSMG2Q969U7 264 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 TRMT2BQ96GJ1 504 aaKnown RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 HSFY1Q96LI6 401 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 ZNF512Q96ME7 567 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 PCDHB18PQ96TA0 734 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 SLC4A5Q9BY07 1137 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 CYLDQ9NQC7 956 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-206ENST00000565990 KRT82Q9NSB4 513 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 ABHD10Q9NUJ1 306 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 CLDND1Q9NY35 253 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 PPP2R2CQ9Y2T4 447 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 USP3Q9Y6I4 520 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 ANAPC1Q9H1A4 1944 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 EYSQ5T1H1 3165 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 TULP2O00295 520 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 LRG1P02750 347 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 MMEP08473 750 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 PTPN2P17706 415 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 KIF11P52732 1056 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 EPHA5P54756 1037 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 SLC8A3P57103 927 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 KLHL30Q0D2K2 578 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 PMF1Q6P1K2 205 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 DENND5BQ6ZUT9 1274 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 ZNF571Q7Z3V5 609 aaPredicted RBP13.31□□□□□ -0.28
SF3B3-206ENST00000565990 ITIH5Q86UX2 942 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 PIGZQ86VD9 579 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 SCN4BQ8IWT1 228 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 NUP93Q8N1F7 819 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 SCML4Q8N228 414 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 SLC20A1Q8WUM9 679 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 DNMT3BQ9UBC3 853 aaKnown RBP13.31□□□□□ -0.28
SF3B3-206ENST00000565990 MYO1AQ9UBC5 1043 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 CYTH4Q9UIA0 394 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 OBSL1O75147 1896 aa13.31□□□□□ -0.28
SF3B3-206ENST00000565990 BRWD1Q9NSI6 2320 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 M0QYV0 167 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 XYLBO75191 536 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 LSM8O95777 96 aaKnown RBP13.3□□□□□ -0.28
SF3B3-206ENST00000565990 TUBBP07437 444 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 CSH1P0DML2 217 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 CSH2P0DML3 217 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 GZMAP12544 262 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 TNFAIP3P21580 790 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 ANXA13P27216 316 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 GOLGA8DPQ0D2H9 430 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-206ENST00000565990 ASTE1Q2TB18 679 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-206ENST00000565990 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 TMC5Q6UXY8 1006 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 TRIM72Q6ZMU5 477 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 LEMD2Q8NC56 503 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 TMEM35BQ8NCS4 154 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 FEZF2Q8TBJ5 459 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 ZMYND15Q9H091 742 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 COG5Q9UP83 839 aa13.3□□□□□ -0.28
SF3B3-206ENST00000565990 SSU72P8A0A1W2PR75 194 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms