RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ARMCX3Q9UH62 379 aaPredicted RBP17.75■□□□□ 0.43
USB1-211ENST00000565662 MTF2Q9Y483 593 aaPredicted RBP17.75■□□□□ 0.43
USB1-211ENST00000565662 PCDHA5Q9Y5H7 936 aa17.75■□□□□ 0.43
USB1-211ENST00000565662 MYH10P35580 1976 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 FAM92AA1XBS5 289 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 ZNF840PA6NDX5 716 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 TRDMT1O14717 391 aaKnown RBP17.74■□□□□ 0.43
USB1-211ENST00000565662 AP1G2O75843 785 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 FGFR1OPO95684 399 aaKnown RBP17.74■□□□□ 0.43
USB1-211ENST00000565662 CXCL12P48061 93 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 GCLMP48507 274 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 NDST1P52848 882 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 CSTF1Q05048 431 aaKnown RBP17.74■□□□□ 0.43
USB1-211ENST00000565662 ADSSL1Q8N142 457 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 TRIML1Q8N9V2 468 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 ZBTB44Q8NCP5 570 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 NELL1Q92832 810 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 CDK5RAP1Q96SZ6 601 aaKnown RBP17.74■□□□□ 0.43
USB1-211ENST00000565662 PHOX2BQ99453 314 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 TLR8Q9NR97 1041 aaKnown RBP17.74■□□□□ 0.43
USB1-211ENST00000565662 RAB20Q9NX57 234 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 GTSE1Q9NYZ3 720 aa17.74■□□□□ 0.43
USB1-211ENST00000565662 SHISA7A6NL88 538 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 GNA14O95837 355 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 OAS1P00973 400 aaKnown RBP17.73■□□□□ 0.43
USB1-211ENST00000565662 TRIM49P0CI25 452 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 TRIM49CP0CI26 452 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 PRKCSHP14314 528 aaPredicted RBP17.73■□□□□ 0.43
USB1-211ENST00000565662 TBXAS1P24557 533 aaPredicted RBP17.73■□□□□ 0.43
USB1-211ENST00000565662 HOXA6P31267 233 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 PSEN1P49768 467 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 SLC5A3P53794 718 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 CDH8P55286 799 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 TAF10Q12962 218 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 MTAPQ13126 283 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 FZD5Q13467 585 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 CCINQ13939 588 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 C1orf220Q5T0J3 134 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 TCERG1LQ5VWI1 586 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 SCARA3Q6AZY7 606 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 ACOT1Q86TX2 421 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 FUKQ8N0W3 1084 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 ARL14EPQ8N8R7 260 aaPredicted RBP17.73■□□□□ 0.43
USB1-211ENST00000565662 TAS1R2Q8TE23 839 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 SH3RF2Q8TEC5 729 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 HNRNPABQ99729 332 aaKnown RBP17.73■□□□□ 0.43
USB1-211ENST00000565662 IL37Q9NZH6 218 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 RAB23Q9ULC3 237 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 CCL26Q9Y258 94 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 CACNA1IQ9P0X4 2223 aa17.73■□□□□ 0.43
USB1-211ENST00000565662 PMM2O15305 246 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 P4HA2O15460 535 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 LRRN2O75325 713 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 CILPO75339 1184 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 EIF2DP41214 584 aaKnown RBP17.72■□□□□ 0.43
USB1-211ENST00000565662 RAP1GAPP47736 663 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 PPP3CAQ08209 521 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 CCDC142Q17RM4 750 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 TMEM196Q5HYL7 178 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 HECTD3Q5T447 861 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 SMYD5Q6GMV2 418 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 SLC2A14Q8TDB8 520 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 ACDQ96AP0 544 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 ZFYVE19Q96K21 471 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 LRRC3BQ96PB8 259 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 ECT2Q9H8V3 914 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 COQ4Q9Y3A0 265 aa17.72■□□□□ 0.43
USB1-211ENST00000565662 CCDC163A0A0D9SF12 145 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 E2F8A0AVK6 867 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 C2orf78A6NCI8 922 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 ADH1CP00326 375 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 UBE2HP62256 183 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 PON2Q15165 354 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 DCAF17Q5H9S7 520 aaPredicted RBP17.71■□□□□ 0.43
USB1-211ENST00000565662 ASCL5Q7RTU5 278 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 FILIP1Q7Z7B0 1213 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 SMYD4Q8IYR2 804 aaPredicted RBP17.71■□□□□ 0.43
USB1-211ENST00000565662 MAML2Q8IZL2 1156 aaPredicted RBP17.71■□□□□ 0.43
USB1-211ENST00000565662 RUBCNQ92622 972 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 CYFIP2Q96F07 1278 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 P2RY13Q9BPV8 354 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 NACA2Q9H009 215 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 SMG9Q9H0W8 520 aaKnown RBP17.71■□□□□ 0.43
USB1-211ENST00000565662 SDCBP2Q9H190 292 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 EPC1Q9H2F5 836 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 EBF3Q9H4W6 596 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 HPS4Q9NQG7 708 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 CHMP5Q9NZZ3 219 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 NME7Q9Y5B8 376 aa17.71■□□□□ 0.43
USB1-211ENST00000565662 MYO16Q9Y6X6 1858 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.7■□□□□ 0.42
USB1-211ENST00000565662 LEFTY2O00292 366 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 CLDN5O00501 218 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 TNFRSF10BO14763 440 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 LILRB5O75023 590 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 ABL1P00519 1130 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
USB1-211ENST00000565662 CDR1P51861 262 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 USP46P62068 366 aa17.7■□□□□ 0.42
USB1-211ENST00000565662 TNK2Q07912 1038 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms