RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 FAM160A2Q8N612 972 aaPredicted RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 KIAA0895Q8NCT3 520 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 CCDC150Q8NCX0 1101 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 PDZD8Q8NEN9 1154 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 RPLP0P6Q8NHW5 317 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 CCDC26Q8TAB7 109 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 SCAMP5Q8TAC9 235 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 TAF4BQ92750 862 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 TTLL2Q9BWV7 592 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 IMPG2Q9BZV3 1241 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 DNAI2Q9GZS0 605 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 SCAND2PQ9GZW5 306 aaPredicted RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 GZF1Q9H116 711 aaPredicted RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 SDCBP2Q9H190 292 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 ARRDC1-AS1Q9H2J1 176 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 KCTD10Q9H3F6 313 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 CFAP97Q9P2B7 532 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 CDV3Q9UKY7 258 aaKnown RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 HPSEQ9Y251 543 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 INVSQ9Y283 1065 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 ZDHHC9Q9Y397 364 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 SH3BP1Q9Y3L3 701 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 NME7Q9Y5B8 376 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 MTCL1Q9Y4B5 1905 aaKnown RBP6.81□□□□□ -1.32
TCF4-228ENST00000565393 MUC6Q6W4X9 2439 aa6.81□□□□□ -1.32
TCF4-228ENST00000565393 COCHO43405 550 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 AKAP3O75969 853 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 BEST1O76090 585 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 RHOBTB3O94955 611 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 PAPSS2O95340 614 aaPredicted RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 HLA-DRAP01903 254 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 CCDC130P13994 396 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 NR2F2P24468 414 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 ADORA2BP29275 332 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 PSMC2P35998 433 aaKnown RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 SLC6A11P48066 632 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 ATXN1P54253 815 aaKnown RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 SLC7A9P82251 487 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 DPYDQ12882 1025 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 DMC1Q14565 340 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 DHCR24Q15392 516 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 CSRP2Q16527 193 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 ZACNQ401N2 412 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 BTBD8Q5XKL5 378 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 SPOPLQ6IQ16 392 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 RHBDF2Q6PJF5 856 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 PAQR9Q6ZVX9 377 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 INTS8Q75QN2 995 aaKnown RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 SYT13Q7L8C5 426 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 FAM35AQ86V20 835 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 UNC93AQ86WB7 457 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 DDX42Q86XP3 938 aaKnown RBP eCLIP6.8□□□□□ -1.32
TCF4-228ENST00000565393 FAM186BQ8IYM0 893 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 CRYBG2Q8N1P7 616 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 CCDC33Q8N5R6 958 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 NAT16Q8N8M0 369 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 C12orf29Q8N999 325 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 SLC2A14Q8TDB8 520 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 JAKMIP2Q96AA8 810 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 CYFIP2Q96F07 1278 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 EEF2KMTQ96G04 330 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 SMARCD1Q96GM5 515 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 HEXIM2Q96MH2 286 aaKnown RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 HHIPQ96QV1 700 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 PNKPQ96T60 521 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 VRTNQ9H8Y1 702 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 GDPD2Q9HCC8 539 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 PARD6AQ9NPB6 346 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 DMAP1Q9NPF5 467 aaPredicted RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 SEMA4GQ9NTN9 838 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 FAM49BQ9NUQ9 324 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 COMMD8Q9NX08 183 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 DLL3Q9NYJ7 618 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 TBC1D14Q9P2M4 693 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
TCF4-228ENST00000565393 TRAF3IP3Q9Y228 551 aa6.8□□□□□ -1.32
TCF4-228ENST00000565393 ZNF318Q5VUA4 2279 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 CCDC163A0A0D9SF12 145 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 A0A1W2PQ27 194 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 A0A1W2PQ64 194 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 A0A1W2PQD8 194 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 E2F8A0AVK6 867 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TBC1D3BA6NDS4 549 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 K7EQS6 105 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 DCLK1O15075 740 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 MAP3K13O43283 966 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 RHOBTB1O94844 696 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 APBB3O95704 486 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 ADH1CP00326 375 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 OAS1P00973 400 aaKnown RBP6.79□□□□□ -1.32
TCF4-228ENST00000565393 APODP05090 189 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 FAM200BP0CF97 657 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TRIM49P0CI25 452 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TRIM49CP0CI26 452 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 IRF1P10914 325 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TCF3P15923 654 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 CD58P19256 250 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 KCNA4P22459 653 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms