RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPG7-211ENST00000565370 GPIHBP1Q8IV16 184 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 FUKQ8N0W3 1084 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CPA6Q8N4T0 437 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 ATP2A3Q93084 1043 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 SLC35C1Q96A29 364 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 GBP4Q96PP9 640 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 SPATA6Q9NWH7 488 aaPredicted RBP13.03□□□□□ -0.32
SPG7-211ENST00000565370 COMMD8Q9NX08 183 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 DLGAP2Q9P1A6 1054 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 ARHGAP26Q9UNA1 814 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CCL26Q9Y258 94 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 CFAP54Q96N23 3096 aa13.03□□□□□ -0.32
SPG7-211ENST00000565370 C2orf78A6NCI8 922 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 SPECC1L-ADORA2AF8WAN1 911 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 GFRA3O60609 400 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 CCDC192P0DO97 292 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
SPG7-211ENST00000565370 HDCP19113 662 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 CTHP32929 405 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 CACNA2D1P54289 1103 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 SLC8A3P57103 927 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 TAF10Q12962 218 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 ZNF77Q15935 545 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 CAMK4Q16566 473 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 C1orf210Q8IVY1 113 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 ARL14EPQ8N8R7 260 aaPredicted RBP13.02□□□□□ -0.33
SPG7-211ENST00000565370 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 FBXO44Q9H4M3 255 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 PNPLA8Q9NP80 782 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 CISHQ9NSE2 258 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 TMEM30AQ9NV96 361 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
SPG7-211ENST00000565370 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 P4HA2O15460 535 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 LRRN2O75325 713 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 NFATC1O95644 943 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 TCF3P15923 654 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 FMO5P49326 533 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 TUBP50607 506 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 MAP3K7CLP57077 242 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 CUL2Q13617 745 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 C12orf29Q8N999 325 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 SEMA4DQ92854 862 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 JAKMIP2Q96AA8 810 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 CLDN23Q96B33 292 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 CYFIP2Q96F07 1278 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 NT5C1BQ96P26 610 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 TWNKQ96RR1 684 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 KCNK16Q96T55 309 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 HNRNPABQ99729 332 aaKnown RBP13.01□□□□□ -0.33
SPG7-211ENST00000565370 NACA2Q9H009 215 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 CLSTN2Q9H4D0 955 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 CSNK1G1Q9HCP0 422 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 GKN1Q9NS71 199 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 GTSE1Q9NYZ3 720 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 GCNT4Q9P109 453 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 DACH1Q9UI36 760 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 COQ4Q9Y3A0 265 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 F5P12259 2224 aa13.01□□□□□ -0.33
SPG7-211ENST00000565370 PMM2O15305 246 aa13□□□□□ -0.33
SPG7-211ENST00000565370 OAS1P00973 400 aaKnown RBP13□□□□□ -0.33
SPG7-211ENST00000565370 MBL2P11226 248 aaPredicted RBP13□□□□□ -0.33
SPG7-211ENST00000565370 BMP6P22004 513 aa13□□□□□ -0.33
SPG7-211ENST00000565370 SOX9P48436 509 aa13□□□□□ -0.33
SPG7-211ENST00000565370 STX17P56962 302 aa13□□□□□ -0.33
SPG7-211ENST00000565370 SLC7A9P82251 487 aa13□□□□□ -0.33
SPG7-211ENST00000565370 TNK2Q07912 1038 aa13□□□□□ -0.33
SPG7-211ENST00000565370 NR1H3Q13133 447 aa13□□□□□ -0.33
SPG7-211ENST00000565370 RUNX3Q13761 415 aa13□□□□□ -0.33
SPG7-211ENST00000565370 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
SPG7-211ENST00000565370 ZNF394Q53GI3 561 aa13□□□□□ -0.33
SPG7-211ENST00000565370 DGKKQ5KSL6 1271 aa13□□□□□ -0.33
SPG7-211ENST00000565370 PAQR9Q6ZVX9 377 aa13□□□□□ -0.33
SPG7-211ENST00000565370 KIAA1958Q8N8K9 716 aa13□□□□□ -0.33
SPG7-211ENST00000565370 TTC8Q8TAM2 541 aa13□□□□□ -0.33
SPG7-211ENST00000565370 OSCP1Q8WVF1 389 aa13□□□□□ -0.33
SPG7-211ENST00000565370 TMEM176AQ96HP8 235 aa13□□□□□ -0.33
SPG7-211ENST00000565370 HEXIM2Q96MH2 286 aaKnown RBP13□□□□□ -0.33
SPG7-211ENST00000565370 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
SPG7-211ENST00000565370 SMOQ99835 787 aa13□□□□□ -0.33
SPG7-211ENST00000565370 ARID3AQ99856 593 aa13□□□□□ -0.33
SPG7-211ENST00000565370 DUSP9Q99956 384 aaKnown RBP13□□□□□ -0.33
SPG7-211ENST00000565370 FAM83CQ9BQN1 747 aa13□□□□□ -0.33
SPG7-211ENST00000565370 NUP62CLQ9H1M0 184 aa13□□□□□ -0.33
SPG7-211ENST00000565370 CHRDQ9H2X0 955 aa13□□□□□ -0.33
SPG7-211ENST00000565370 EBF3Q9H4W6 596 aa13□□□□□ -0.33
SPG7-211ENST00000565370 TLR8Q9NR97 1041 aaKnown RBP13□□□□□ -0.33
SPG7-211ENST00000565370 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
SPG7-211ENST00000565370 RWDD2AQ9UIY3 292 aa13□□□□□ -0.33
SPG7-211ENST00000565370 FBXO4Q9UKT5 387 aa13□□□□□ -0.33
SPG7-211ENST00000565370 MTF2Q9Y483 593 aaPredicted RBP13□□□□□ -0.33
SPG7-211ENST00000565370 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13□□□□□ -0.33
SPG7-211ENST00000565370 CPQQ9Y646 472 aa13□□□□□ -0.33
SPG7-211ENST00000565370 LEFTY2O00292 366 aa12.99□□□□□ -0.33
SPG7-211ENST00000565370 SLC9A3R1O14745 358 aaPredicted RBP12.99□□□□□ -0.33
SPG7-211ENST00000565370 TNFRSF10BO14763 440 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms