RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 E5RJQ4 531 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 BCAR3O75815 825 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 U2AF1L5P0DN76 240 aaPredicted RBP5.3□□□□□ -1.56
CHD9-212ENST00000564641 SFPQP23246 707 aaKnown RBP eCLIP5.3□□□□□ -1.56
CHD9-212ENST00000564641 IL1R2P27930 398 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 ADORA2AP29274 412 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 PRKAR1BP31321 381 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 RENBPP51606 427 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 ANAPC15P60006 121 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 U2AF1Q01081 240 aaKnown RBP eCLIP5.3□□□□□ -1.56
CHD9-212ENST00000564641 E2F1Q01094 437 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 CTBP1Q13363 440 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 ANO6Q4KMQ2 910 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 MRPL10Q7Z7H8 261 aaKnown RBP5.3□□□□□ -1.56
CHD9-212ENST00000564641 FAM177A1Q8N128 213 aaPredicted RBP5.3□□□□□ -1.56
CHD9-212ENST00000564641 SLC35G2Q8TBE7 412 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 BPIFB1Q8TDL5 484 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 PPP2R3CQ969Q6 453 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 ZNF518BQ9C0D4 1074 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 MS4A7Q9GZW8 240 aaPredicted RBP5.3□□□□□ -1.56
CHD9-212ENST00000564641 XPNPEP3Q9NQH7 507 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 ELOVL5Q9NYP7 299 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.3□□□□□ -1.56
CHD9-212ENST00000564641 STAP2Q9UGK3 403 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 ZNF180Q9UJW8 692 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 SNX14Q9Y5W7 946 aa5.3□□□□□ -1.56
CHD9-212ENST00000564641 TMEM232C9JQI7 657 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 AP4M1O00189 453 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 DSCR3O14972 297 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 PHGDHO43175 533 aaKnown RBP5.29□□□□□ -1.56
CHD9-212ENST00000564641 PDE8BO95263 885 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 FGAP02671 866 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 NPR1P16066 1061 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 ARHGAP25P42331 645 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 NR4A2P43354 598 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 AGFG1P52594 562 aaKnown RBP5.29□□□□□ -1.56
CHD9-212ENST00000564641 BCAT1P54687 386 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 SLC13A2Q13183 592 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 TTF1Q15361 905 aaPredicted RBP5.29□□□□□ -1.56
CHD9-212ENST00000564641 CYP1B1Q16678 543 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 FAM187BQ17R55 369 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 INSCQ1MX18 579 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 ZIK1Q3SY52 487 aaPredicted RBP5.29□□□□□ -1.56
CHD9-212ENST00000564641 JPH3Q8WXH2 748 aaPredicted RBP5.29□□□□□ -1.56
CHD9-212ENST00000564641 CUL5Q93034 780 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 CCDC17Q96LX7 622 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 C17orf80Q9BSJ5 609 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 A1CFQ9NQ94 594 aaKnown RBP5.29□□□□□ -1.56
CHD9-212ENST00000564641 PDGFCQ9NRA1 345 aa5.29□□□□□ -1.56
CHD9-212ENST00000564641 THOC2Q8NI27 1593 aaKnown RBP5.29□□□□□ -1.56
CHD9-212ENST00000564641 NESP48681 1621 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 hCG_2014768A0A024R1R8 64 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 TCRBV5S1A1TA0A578 114 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 GCATO75600 419 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 RFPL1O75677 317 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 FGBP02675 491 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 A1BGP04217 495 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 EN2P19622 333 aaPredicted RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 EPHA3P29320 983 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 GKP32189 559 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 POLGP54098 1239 aaPredicted RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 MCL1Q07820 350 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 ZNF268Q14587 947 aaPredicted RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 MLC1Q15049 377 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 TWIST1Q15672 202 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 LY6KQ17RY6 165 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 RNASE12Q5GAN4 147 aaKnown RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 MEX3CQ5U5Q3 659 aaKnown RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 BCDIN3DQ7Z5W3 292 aaKnown RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 MPP5Q8N3R9 675 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 TAAR9Q96RI9 348 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 PRR25Q96S07 402 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 PPP1R9BQ96SB3 815 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 ACO2Q99798 780 aaKnown RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 TRIM36Q9NQ86 728 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 SNX15Q9NRS6 342 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 MAFFQ9ULX9 164 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 SCAF8Q9UPN6 1271 aaKnown RBP5.28□□□□□ -1.56
CHD9-212ENST00000564641 USP22Q9UPT9 525 aa5.28□□□□□ -1.56
CHD9-212ENST00000564641 MRC2Q9UBG0 1479 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 ANKRD62A6NC57 917 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 MYMKA6NI61 221 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 SOCS2O14508 198 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 PMPCBO75439 489 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 RNF8O76064 485 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 MT-CO3P00414 261 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 HOXB6P17509 224 aaKnown RBP5.27□□□□□ -1.57
CHD9-212ENST00000564641 ATP5F1P24539 256 aaPredicted RBP5.27□□□□□ -1.57
CHD9-212ENST00000564641 EPHB1P54762 984 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 B3GNT9Q6UX72 402 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 PTCHD4Q6ZW05 846 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 NANOGP1Q8N7R0 232 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 RAPGEF4Q8WZA2 1011 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 GPATCH3Q96I76 525 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 MMS19Q96T76 1030 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 TRIM5Q9C035 493 aa5.27□□□□□ -1.57
CHD9-212ENST00000564641 ZMAT3Q9HA38 289 aaKnown RBP5.27□□□□□ -1.57
CHD9-212ENST00000564641 GBA2Q9HCG7 927 aaPredicted RBP5.27□□□□□ -1.57
CHD9-212ENST00000564641 PI4KBQ9UBF8 816 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms